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feat: add TreeTime v1 as treetime1 (latest nightly) - #300

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ivan-aksamentov merged 1 commit into
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feat/treetime1-latest
Oct 26, 2026
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ivan-aksamentov merged 1 commit into
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feat/treetime1-latest

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@ivan-aksamentov

@ivan-aksamentov ivan-aksamentov commented Oct 26, 2026 •

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Alternative PRs, merge one:

Sibling Docker/Conda PRs:

Changes:

  • Adds TreeTime v1 (Rust rewrite, standalone binary) to the image as treetime1, downloaded from the latest nightly release, like nextclade3
  • TreeTime v0 is unchanged: treetime and the Python package that Augur imports still come from phylo-treetime

TreeTime v1 is a rewrite of TreeTime as a standalone executable. Shipping it as treetime1, next to TreeTime v0 (the phylo-treetime package that provides `treetime` and that Augur imports), lets pathogen workflows opt in step by step without changing any existing build, as nextclade2 and nextclade3 did for Nextclade.

- Download the latest nightly build, which TreeTime publishes on every change, so each image rebuild picks up the current TreeTime v1 until it has tagged releases

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validate-platforms output looks good:

$ treetime1 --version
treetime 1.0.0-nightly.20261026T140541Z+d7868ab

@ivan-aksamentov
ivan-aksamentov merged commit 549b07b into master Oct 26, 2026
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@ivan-aksamentov
ivan-aksamentov deleted the feat/treetime1-latest branch October 26, 2026 18:20
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2 participants