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Supplementary tools for analysis of anndata + Scanpy scverse

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Scanpy misc functions

Installation

pip install -U git+https://github.com/vjbaskar/scvm.git

Depends only on setuptools and plotly. It uses packages in the scverse but I have not hard required it in the package as it may overwrite your version of important packages.

Usage

import scvm

Help

help(scvm)

Documentation

adata.describe(): Describes the type of data in adata.X = raw/norm/log/scaled

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Supplementary tools for analysis of anndata + Scanpy scverse

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