virtual-cell-models

Here are 3 public repositories matching this topic...

Boom5426 / PertResolve

A measurement-resolution framework for interpreting fine-grained perturbation prediction

single-cell perturbation single-cell-analysis virtual-cell perturbation-methods perturbation-prediction virtual-cells virtual-cell-models

Updated Sep 30, 2026
Python

AppliedScientific / VCBench

Star

VCBench: capability-stratified benchmark for single-cell foundation models

benchmark machine-learning bioinformatics deep-learning scrna-seq reproducibility transcriptomics single-cell gene-regulatory-networks foundation-models grn-inference perturbation-prediction cross-species-transfer virtual-cells virtual-cell-models

Updated Jun 24, 2026
Python

Danpc11 / mechanogenomic-virtual-cell

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Mechanogenomic virtual-cell model linking substrate stiffness, nuclear mechanotransduction, YAP/TAZ activity, and fibrosis-associated transcriptional trajectories.

biophysics mechanobiology cell-nucleus mechanotransduction virtual-cell-models

Updated Aug 24, 2026
Python

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