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Vrs output#855

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John-F-Wagstaff wants to merge 3 commits into
developfrom
vrs_output
Draft

Vrs output#855
John-F-Wagstaff wants to merge 3 commits into
developfrom
vrs_output

Add VRS output capacity to VV via format_as_vrs

52f211b
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Codecov / codecov/project succeeded Jul 3, 2026 in 0s

77.67% (+0.55%) compared to 9a412ff

View this Pull Request on Codecov

77.67% (+0.55%) compared to 9a412ff

Details

Codecov Report

❌ Patch coverage is 90.68878% with 73 lines in your changes missing coverage. Please review.
✅ Project coverage is 77.67%. Comparing base (9a412ff) to head (52f211b).

Files with missing lines Patch % Lines
VariantValidator/modules/use_checking.py 75.86% 35 Missing ⚠️
VariantValidator/modules/mappers.py 86.88% 8 Missing ⚠️
VariantValidator/modules/vrs_utils.py 97.82% 8 Missing ⚠️
VariantValidator/modules/valoutput.py 82.05% 7 Missing ⚠️
VariantValidator/modules/complex_descriptions.py 85.29% 5 Missing ⚠️
VariantValidator/modules/format_converters.py 81.81% 4 Missing ⚠️
VariantValidator/modules/hgvs_utils.py 62.50% 3 Missing ⚠️
VariantValidator/modules/vvMixinCore.py 95.00% 3 Missing ⚠️
Additional details and impacted files 
@@             Coverage Diff             @@
##           develop     #855      +/-   ##
===========================================
+ Coverage    77.11%   77.67%   +0.55%     
===========================================
  Files           37       38       +1     
  Lines        13071    13488     +417     
===========================================
+ Hits         10080    10477     +397     
- Misses        2991     3011      +20

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