Consolidate folder structure for easier discoverability and navigation

Aim to consolidate folder structure to simplify discoverability and navigation with the increase of agents being deployed into this repo. Proposed folder structure I've reviewed with the team and will submit a PR for: 

<img width="855" height="530" alt="Image" src="https://github.com/user-attachments/assets/ed2c0768-2c75-4eea-be43-990f0f3e0621" />