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fix: Keep flags and overrides while a data file is rewritten in place - #504

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kinyoklion wants to merge 9 commits into
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rlamb/overrides-go-in-place-rewrite
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kinyoklion wants to merge 9 commits into
v7from
rlamb/overrides-go-in-place-rewrite

fix: Read every data file even after one fails, so no bound is left over

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