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Achievements

Achievement: Pair Extraordinairex2Achievement: QuickdrawAchievement: YOLOAchievement: Pull Sharkx3Achievement: StarstruckAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair Extraordinairex2Achievement: QuickdrawAchievement: YOLOAchievement: Pull Sharkx3Achievement: StarstruckAchievement: Arctic Code Vault Contributor

Highlights

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Organizations

@glotaran @conda-forge

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jsnel/README.md

Wireframe loss landscape with an optimization path descending into a minimum.

Computational physicist at Cassini Technologies, with a background in photosynthesis research. My open-source work primarily focuses on global and target analysis of time-resolved spectroscopy.

Selected work

pyglotaran repository card pyglotaran-extras repository card

With worked examples in pyglotaran-examples.

TIMP | Glotaran
TIMP is an R package for global and target analysis; Glotaran is its Java GUI for interactive data exploration, kinetic modeling and fitting. Both are predecessors of pyglotaran.

glotaran.org (co-maintainer)
Project website with the software, documentation, publications and getting-started material.

Ask me about: global and target analysis of time-resolved spectroscopy data · modeling of energy transfer and trapping in the thylakoid membrane · maintaining scientific Python packages · the optics of the human eye · Zernike polynomials

Publications: Google Scholar · ORCID · Vrije Universiteit Amsterdam (guest researcher)

GitHub stats

GitHub stats: stars, commits, pull requests and reviews Most used languages

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  1. glotaran/pyglotaran glotaran/pyglotaran Public

    A Python library for Global and Target Analysis of time-resolved spectroscopy data

    Python 61 19

  2. glotaran/pyglotaran-examples glotaran/pyglotaran-examples Public

    This repository hold examples showcasing the use of the pyglotaran package

    Jupyter Notebook 5 7

  3. glotaran/pyglotaran-extras glotaran/pyglotaran-extras Public

    Extra batteries to super-charge pyglotaran's plotting capabilities.

    Python 3 5

  4. glotaran/glotaran-legacy glotaran/glotaran-legacy Public

    The original global and target analysis software - GUI for TIMP built with Java

    Java 13 7

  5. glotaran/TIMP glotaran/TIMP Public

    TIMP is an R package for fitting superposition models that implements the partitioned variable projection algorithm. The package has been extensively applied to modeling spectroscopy and Fluoresce…

    R 3 1

  6. glotaran/paramGUI glotaran/paramGUI Public

    paramGUI is a Shiny based R-package for teaching parameter estimation examples inspired by time-resolved spectroscopy

    R 2 3