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Adding more presets as separate files or as one file similar to CytoTable?

Status: Open.

#329 In cytomining/coSMicQC;

· jenna-tomkinson opened on Apr 9, 2026

Simplify analyze.py by moving helper functions into separate script

Status: Open.

#328 In cytomining/coSMicQC;

· jenna-tomkinson opened on Apr 8, 2026

Add optional parameters to return pandas dataframe

Status: Open.

Feature

#304 In cytomining/coSMicQC;

· d33bs opened on Jan 27, 2026

Create dedicated filtering function

enhancementNew feature or requestNew feature or request

Status: Open.

#268 In cytomining/coSMicQC;

· jenna-tomkinson opened on Oct 20, 2025

How to handle data from multiple projects?

Status: Open.

#254 In cytomining/coSMicQC;

· jenna-tomkinson opened on Sep 4, 2025

Add raw value thresholding as an option compared to z-score thresholding

Status: Open.

#248 In cytomining/coSMicQC;

· MikeLippincott opened on Aug 18, 2025

Potentially add flexiblity for features, add as parameters

Status: Open.

#218 In cytomining/coSMicQC;

· jenna-tomkinson opened on May 19, 2025

Improve multiple image display for coSMicQC to enable quick analysis

enhancementNew feature or requestNew feature or request

visualizationPertains to data visualization or graphical interfacesPertains to data visualization or graphical interfaces

Status: Open.

Feature

#210 In cytomining/coSMicQC;

· jenna-tomkinson opened on Apr 24, 2025

Add documentation regarding the assumption of normal distribution for z-scoring

Status: Open.

#201 In cytomining/coSMicQC;

· jenna-tomkinson opened on Mar 11, 2025

Create folder with multiple "presets" that come from preprint or published work

Status: Open.

#198 In cytomining/coSMicQC;

· jenna-tomkinson opened on Mar 3, 2025

Add new threshold set(s) based on whole image features

enhancementNew feature or requestNew feature or request

Status: Open.

#167 In cytomining/coSMicQC;

· d33bs opened on Dec 31, 2024

Add find_outliers parameter for "all columns" or "filtered columns"

enhancementNew feature or requestNew feature or request

Status: Open.

#152 In cytomining/coSMicQC;

· d33bs opened on Dec 10, 2024