test singularity - final

Author: chyumin

.github/workflows/test_containers_gpu.yml

@@ -40,13 +40,6 @@ jobs:
           pip install -U pip
           pip install -r requirements_test.txt
 
-          sudo apt install apt-transport-https ca-certificates curl software-properties-common
-          curl -fsSL https://download.docker.com/linux/ubuntu/gpg | sudo apt-key add -
-          sudo add-apt-repository "deb [arch=amd64] https://download.docker.com/linux/ubuntu `lsb_release -cs` test"
-          sudo apt update
-          sudo apt install docker-ce
-          pip install docker
-
       - uses: eWaterCycle/setup-singularity@v7
         with:
           singularity-version: 3.8.3

tests/test_containers_gpu.py

@@ -34,7 +34,7 @@ def run_kwargs(work_dir):
         num_segments=1
     )
     test_recording = test_recording.save(name='toy')
-    return dict(recording=test_recording, verbose=True, docker_image=True)
+    return dict(recording=test_recording, verbose=True, singularity_image=True)
 
 
 def test_kilosort2(run_kwargs):