Issues

• SquigglePlot command is not working

  Psy-Fer/SquiggleKit#64 · Filter by author TTT16 opened on Mar 20, 2024
  6

• Estimate length of long homopolymers in DNA

  Psy-Fer/SquiggleKit#63 · Filter by author dweemx opened on Jan 29, 2024
  5

• ImportError: Cannot load backend 'TkAgg' which requires the 'tk' interactive framework, as 'headless' is currently running

  Psy-Fer/SquiggleKit#62 · Filter by author vetmohit89 opened on Dec 29, 2022
  1

• ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all()

  Psy-Fer/SquiggleKit#61 · Filter by author vetmohit89 opened on Dec 29, 2022
  4

• no filenames list built

  bug
  Psy-Fer/SquiggleKit#59 · Filter by author Qvdauwer opened on Sep 28, 2022
  5

  

• unable to plot individual .fast5 after installing vbz plugin

  Psy-Fer/SquiggleKit#58 · Filter by author emmarl25 opened on Sep 23, 2022
  3

  

• Scrappie replacement

  bugenhancement
  Psy-Fer/SquiggleKit#57 · Filter by author sirselim opened on Jul 25, 2022
  

• Fast5_fetcher_multi.py no output

  Psy-Fer/SquiggleKit#55 · Filter by author Salvobioinfo opened on Apr 2, 2022
  2

• Error plotting with SquigglePlot.py

  bug
  Psy-Fer/SquiggleKit#51 · Filter by author capoony opened on Nov 8, 2021
  8

  

• Job is in D state for a long time

  bug
  Psy-Fer/SquiggleKit#50 · Filter by author kaltinel opened on Jul 29, 2021
  10

  

• Issue about MotifSeq.py.

  help wanted
  Psy-Fer/SquiggleKit#48 · Filter by author Goatofmountain opened on Apr 9, 2021
  1

  

• demultiplexing fast5

  question
  Psy-Fer/SquiggleKit#46 · Filter by author aspitaleri opened on Mar 9, 2021
  19

  

• SquigglePull - KeyError: 'Unable to open object (component not found)'

  Psy-Fer/SquiggleKit#45 · Filter by author asttra opened on Mar 9, 2021
  2

  

• Using MotifSeq coordinates within single reads to segment fast5 file at those positions.

  enhancementquestion
  Psy-Fer/SquiggleKit#44 · Filter by author gallardo-seq opened on Jan 18, 2021
  5

  

• output files made by SquigglePull.py containing nothing

  bug
  Psy-Fer/SquiggleKit#43 · Filter by author liu-pinnng opened on Dec 16, 2020
  12

  

• Issue visualizing squiggles with recent fast5 file

  bug
  Psy-Fer/SquiggleKit#42 · Filter by author mriekje opened on Dec 3, 2020
  3

  

• SquiggleKit can be used for extract raw current signal in specific position of read?

  enhancementquestion
  Psy-Fer/SquiggleKit#36 · Filter by author weir12 opened on Apr 28, 2020
  3

  

• SquigglePlot.py does not result in anything

  bughelp wanted
  Psy-Fer/SquiggleKit#35 · Filter by author sem0036 opened on Apr 23, 2020
  13

  

• Using RNA for MotifSeq

  help wantedquestion
  Psy-Fer/SquiggleKit#34 · Filter by author epi-gene opened on Mar 24, 2020
  9

  

• MotifSeq output all hits

  enhancement
  Psy-Fer/SquiggleKit#32 · Filter by author mattdmem opened on Feb 14, 2020
  1

  

• MotifSeq read error

  enhancementmulti-fast5
  Psy-Fer/SquiggleKit#26 · Filter by author obehrto opened on Dec 9, 2019
  3