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fix: pull the rebuilt tool images from vjaganat90 #28

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Merged
sameeul merged 2 commits into from
Oct 15, 2026
Merged

fix: pull the rebuilt tool images from vjaganat90 #28

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28b0e05
fix: pull the rebuilt tool images from vjaganat90
vjaganat90 Oct 14, 2026
3f4aa55
fix: file-renaming's mapDirectory is a flag
vjaganat90 Oct 14, 2026
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2 changes: 1 addition & 1 deletion cwl_adapters/basic-flatfield-estimation.cwl
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Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@ doc: |-

requirements:
DockerRequirement:
dockerPull: polusai/basic-flatfield-estimation-plugin:2.1.1
dockerPull: vjaganat90/basic-flatfield-estimation-tool:2.1.6-dev0
# See https://www.commonwl.org/v1.0/CommandLineTool.html#InitialWorkDirRequirement
InitialWorkDirRequirement:
listing:
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2 changes: 1 addition & 1 deletion cwl_adapters/bbbcdownload.cwl
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Expand Up @@ -9,7 +9,7 @@ doc: |-

requirements:
DockerRequirement:
dockerPull: polusai/bbbc-download-plugin:0.1.0-dev1
dockerPull: vjaganat90/bbbc-download-plugin:0.1.1-dev1
# See https://www.commonwl.org/v1.0/CommandLineTool.html#InitialWorkDirRequirement
InitialWorkDirRequirement:
listing:
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4 changes: 2 additions & 2 deletions cwl_adapters/file-renaming.cwl
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Expand Up @@ -9,7 +9,7 @@ doc: |-

requirements:
DockerRequirement:
dockerPull: polusai/file-renaming-plugin:0.2.1-dev0 # NOTE: 0.2.3 not pushed yet
dockerPull: vjaganat90/file-renaming-tool:0.2.6-dev0
# See https://www.commonwl.org/v1.0/CommandLineTool.html#InitialWorkDirRequirement
InitialWorkDirRequirement:
listing:
Expand All @@ -31,7 +31,7 @@ inputs:
mapDirectory:
inputBinding:
prefix: --mapDirectory
type: string? # enum: raw, map, default
type: boolean? # file-renaming-tool: a flag; the plugin took raw, map or nothing

preview:
label: Generate a JSON file describing what the outputs should be
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2 changes: 1 addition & 1 deletion cwl_adapters/image_assembler.cwl
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Expand Up @@ -10,7 +10,7 @@ doc: |-

requirements:
DockerRequirement:
dockerPull: polusai/image-assembler-tool:1.4.3
dockerPull: vjaganat90/image-assembler-tool:1.4.4-dev0
# See https://www.commonwl.org/v1.0/CommandLineTool.html#InitialWorkDirRequirement
InitialWorkDirRequirement:
listing:
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2 changes: 1 addition & 1 deletion cwl_adapters/montage.cwl
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Expand Up @@ -10,7 +10,7 @@ doc: |-

requirements:
DockerRequirement:
dockerPull: polusai/montage-plugin:0.5.0
dockerPull: vjaganat90/montage-tool:0.5.3-dev0
# See https://www.commonwl.org/v1.0/CommandLineTool.html#InitialWorkDirRequirement
InitialWorkDirRequirement:
listing:
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2 changes: 1 addition & 1 deletion cwl_adapters/ome-converter.cwl
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Expand Up @@ -10,7 +10,7 @@ doc: |-

requirements:
DockerRequirement:
dockerPull: polusai/ome-converter-tool:0.3.3-dev4
dockerPull: vjaganat90/ome-converter-tool:0.3.5-dev0
# See https://www.commonwl.org/v1.0/CommandLineTool.html#InitialWorkDirRequirement
InitialWorkDirRequirement:
listing:
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2 changes: 1 addition & 1 deletion cwl_adapters/precompute_slide.cwl
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Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@ doc: |-

requirements:
DockerRequirement:
dockerPull: polusai/precompute-slide-tool:1.7.3-dev0
dockerPull: vjaganat90/precompute-slide-tool:1.7.3-dev1
# See https://www.commonwl.org/v1.0/CommandLineTool.html#InitialWorkDirRequirement
InitialWorkDirRequirement:
listing:
Expand Down
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