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OpenSyndrome
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Enrich ontologies
- #18
#18
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anapaulagomes
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May 20, 2026
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Enrich ontologies
#18
anapaulagomes
merged 12 commits into
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OpenSyndrome/open-syndrome-python:main
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enrich-ontologies
OpenSyndrome/open-syndrome-python:enrich-ontologies
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Commits on Mar 17, 2026
Query ontology ids
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Add to cli
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Commits on Mar 18, 2026
Skip container types
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Add enrich option to add ontologies id to existing JSON
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Add basic instructions
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Test text2term as a mapper
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Use text2term cache and add as dependency
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Commits on May 19, 2026
Isolate model from env
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Add bioregistry and ols-client
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Remove specific mapper from helper
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Introduce EBIClient
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Optimize search of terms by batching them
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