Adapt vis_clus() functions for use with Xenium data#121
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`datatype` from vis_clus() and vis_gene()
vis_clus(), vis_gene() and related functions. Fix examples.
…g Xenium data. `fetch_data()` now includes example Xenium data.
lcolladotor
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May 20, 2026
Merge pull request #121 from LieberInstitute/xenium_vis_functions
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Adressing #120
Added
vis_clus(datatype = c("Visium", "Xenium"))option. Adaptedvis_clus_pto centroid basedvis_clus_cwhich expects 'x_centroid' and 'y_centroid' as spatialCoords and does not add images to plots.Also added
fetch_data(type = "spe_xenium_example")to provide example data for plotting xenium. Includes two samples from ERC xenium data.Output of vis_clus example plot p6:
