Add option to specify number of threads for pipeline#83
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The number of threads will be used for mapping and variant calling with delve.
This version is needed to specify the number of threads
For our MVP panel we have 10 amplicons, so this allows the variant calling to be parallized in a way that it should do roughly 2 rounds. This also leaves some room if people run two sequencing experiments at the same time. Maybe we should instead check the number of cores in the future.
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The number of threads will be used for mapping and variant calling with delve.
Note: needs to wait for new version of delve with option to specify threads