Issues

• Xpore diffmod output table is empty

  GoekeLab/xpore#235 · Filter by author nawa2179 opened on Oct 3, 2025
  2

• KeyError when running xpore diffmod

  GoekeLab/xpore#234 · Filter by author jainronit opened on Jan 20, 2025
  1

• Interpreting direction of differential methylation

  GoekeLab/xpore#233 · Filter by author NStrowbridge opened on Dec 9, 2024
  2

• dataprep result is empty

  GoekeLab/xpore#232 · Filter by author Seongmin-Jang-1165 opened on Nov 20, 2024
  4

• Run wiith only one sample

  GoekeLab/xpore#230 · Filter by author Seongmin-Jang-1165 opened on Oct 16, 2024
  1

• Nanopolish "eventalign" command not completing in time limit.

  GoekeLab/xpore#228 · Filter by author baibhav-bioinfo opened on Oct 4, 2024
  1

• RNA004 Inverted DRACH Results

  GoekeLab/xpore#225 · Filter by author BrendanBeahan opened on Jul 23, 2024
  2

• question about the modification category

  GoekeLab/xpore#223 · Filter by author huawen-poppy opened on Jul 21, 2024
  2

• DataPrep error and empty output files

  GoekeLab/xpore#222 · Filter by author cent0134 opened on Jul 19, 2024
  2

• enquire about interpretation of diff_mod rate column

  GoekeLab/xpore#221 · Filter by author g-s-2018 opened on Jul 7, 2024
  2

• error in xpore diffmod

  GoekeLab/xpore#219 · Filter by author lyj95618 opened on Jun 3, 2024
  2

• version number needs to be updated

  GoekeLab/xpore#218 · Filter by author nickst85 opened on May 14, 2024
  1

• KeyError: exon in xpore dataprep

  GoekeLab/xpore#217 · Filter by author mumdark opened on May 2, 2024
  4

• Eventalign.index from m6anet output and RNA004 compatibility

  GoekeLab/xpore#215 · Filter by author rugilemat opened on Mar 26, 2024
  9

• empty output files in dataprep stage

  GoekeLab/xpore#214 · Filter by author villegmb opened on Mar 22, 2024
  6

• question about interpreting the NA value in the mod rate column

  GoekeLab/xpore#207 · Filter by author lyj95618 opened on Dec 14, 2023
  3

• Concern about the P value!

  GoekeLab/xpore#186 · Filter by author M-Chi-1 opened on Sep 23, 2023
  1

• per-read modification scores or assignments for each position

  GoekeLab/xpore#183 · Filter by author adalisan opened on Aug 3, 2023

• Three questions about xpore

  GoekeLab/xpore#182 · Filter by author iamwjy1 opened on Jul 14, 2023

• Can Xpore detect RNA modification other than m6A?

  GoekeLab/xpore#181 · Filter by author fulaibaowang opened on Jun 7, 2023
  3

• diffmod.table missing majority of positions

  GoekeLab/xpore#180 · Filter by author JannesSP opened on Apr 18, 2023
  5

• running into problem with Xpore after merging multiple .fastq and .bam files from same Nanopore run

  GoekeLab/xpore#179 · Filter by author annapopova-scripps opened on Apr 12, 2023
  7

• Empty diffmod.table file, only header generated when running xpore diffmod with preprocessed files, not able to reproduce the data

  GoekeLab/xpore#177 · Filter by author kwonej0617 opened on Mar 7, 2023
  7

• Which of criteria use for get the top significant 1,452 positions?

  GoekeLab/xpore#171 · Filter by author thadasps opened on Jan 1, 2023

• Request for xpore result of HEK293T-rep1

  GoekeLab/xpore#165 · Filter by author rezarahman12 opened on Nov 8, 2022
  2