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fix(installtxn): put back an install a killed commit left behind - #997

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fix(installtxn): put back an install a killed commit left behind#997
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@beardthelion

@beardthelion beardthelion commented Aug 30, 2026

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Fixes #996.

CommitDir publishes by two renames: the live target moves into the transaction workspace as
previous, then the staged copy is renamed into place. Neither is journaled, so a process killed
between them left the target absent with the install's only copy retained in a workspace nothing
ever read. plugins.Load and skills.Load enumerate directories, so the extension disappeared
while the lockfile went on listing it.

Recovery needed one fact the transaction never wrote down: which install a backup belonged to.
CommitDir now records that before it moves anything, and Recover puts the backup back when the
target is absent.

Recovery is bounded on every side, because it is a second data-loss surface. It refuses a
recorded name that is not a single path element inside the install root, never replaces a live
target, identifies a workspace by the name StageDir gives one rather than by contents alone, and
leaves intact anything it cannot attribute.

Every path that takes the install lock recovers, not just the two that install. This is the
part worth reviewing closely. Recovering on the install path alone is worse than not recovering at
all: Remove takes its not-present branch, drops the lockfile entry and reports success while the
backup it never looked at stays on disk, and the next install republishes it, reinstating an
extension the user deleted. Both Remove paths and the internal/terminalpet install hold the
same lock and now do the same thing first.

Recovery stays an explicit call rather than a side effect of Lock. That matches how the other
staged-swap transactions in this repo invoke their repair pass, and it keeps a filesystem mutation
visible at the sites that cause it. Binding it to lock acquisition would cover all five callers for
free, but an acquire function that mutates the filesystem is a surprising contract, and this
repository has no precedent for it.

Behavior change

An interrupted install is now put back the next time anything takes that install root's lock,
rather than staying lost. A workspace left by a version before this change carries no recorded
target, so Recover skips it and it is left in place rather than reclaimed.

The target is also what records how far a commit got, so recovery reads it as the transaction
phase. A target that is absent means the swap never finished and the backup is put back. A target
that is there means the publish rename committed, so the backup beside it is superseded and its
workspace is retired instead of being kept for a later pass. Keeping it was what let a removal be
undone by accident: the removal deleted the live target, and the next recovery then read the absent
target as an interrupted swap and published the stale tree again. Reading the target that way also
required rollback to stop deleting a failed install in place, since a kill partway through that
delete would leave a husk recovery could mistake for a committed publish.

Verification

Each defect was reproduced first, with a passing control, then each guard was ablated individually
and confirmed to fail without it:

  • Drop the marker write, and the test that reads it back from inside the publish callback fails.
  • Drop the path-element check, and the traversal cases fail.
  • Drop Recover from plugins.Install or from skills.Install, and that package's recovery test
    fails while the other stays green.
  • Drop Recover from plugins.Remove, and the removal test fails with the removed plugin back on
    disk and loadable again.
  • Drop the workspace-name check, and recovery consumes an ordinary installed directory that happens
    to contain the same two entries.

One guard could not be made to fail and is called out rather than claimed: the backup-presence
check is an early-out that the following rename already catches. The live-target branch is now
falsifiable, since removing it resurrects a removed extension in both caller packages. What still
cannot be falsified is the narrower claim that a backup never replaces a live target: Go's
os.Rename returns EEXIST on Linux even for an empty destination directory. POSIX permits
replacing an empty one, so that assertion pins the contract rather than one platform's syscall.

gofmt, go vet, go test ./... -race, zero-release build and zero-release smoke are clean on
linux/arm64, with the four affected packages repeated at -count=3. Cross-compiled for
windows/amd64 and darwin/arm64. macOS and Windows are otherwise untested locally and rest on CI;
the change is directory renames, which is where Windows differs most.

Known residuals

  • An interrupted RemoveDir writes no marker, so its workspace stays unattributable and is skipped.
    That window predates this change and is unaffected by it.
  • Recovery does not rank several workspaces recording the same target. That state is not reachable
    through the install path, since recovery runs under the lock before every commit, and a workspace
    it does not restore from is skipped intact rather than deleted.
  • A rollback that cannot move the failed install aside drops its workspace marker, so the retained
    copy survives as a workspace nothing can attribute. Recovery leaves it alone forever. That is
    litter rather than a hazard: an unattributable workspace is never published from.

Summary by CodeRabbit

  • Bug Fixes
    • Interrupted installations are now detected and recovered automatically during subsequent install or remove operations.
    • Existing installations are safely restored when a previous update was interrupted.
    • Recovery avoids overwriting active installations and cleans up obsolete temporary data.
    • Failed updates are handled more safely, preserving recoverable backups and preventing incomplete installations from being left behind.
  • Tests
    • Expanded coverage for recovery across plugins, skills, and terminal pets, including interrupted commits, rollback failures, and removal scenarios.

CommitDir publishes by two renames: the live target moves into a workspace
backup, then the staged copy is renamed into place. Neither is journaled, so a
process killed between them left the target absent with the install's only copy
retained in a workspace nothing ever read. plugins.Load and skills.Load
enumerate directories, so the extension simply disappeared, while the lockfile
went on listing it. Recovering needed one fact the transaction never wrote
down: which install a backup belonged to. CommitDir now records that before it
moves anything, and Recover puts the backup back when the target is absent.

Recovery is a second data-loss surface, so it is bounded on every side. It
refuses a name that is not a single element inside the install root, never
replaces a live target, identifies a workspace by the name StageDir gives one
rather than by contents alone, and leaves intact anything it cannot attribute.

Every path that takes the install lock recovers, not just the two that install.
Recovering on the install path alone is worse than not recovering: a removal
takes the not-present branch, drops the lockfile entry and reports success
while the backup it never looked at stays on disk, and the next install
republishes it, reinstating an extension the user deleted. Removal and the
terminalpet install hold the same lock and now do the same thing first.

Recovery stays an explicit call rather than a side effect of Lock, matching how
the other staged-swap transactions here invoke their repair pass and keeping a
filesystem mutation visible at the sites that cause it.
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📒 Files selected for processing (4)
  • internal/installtxn/installtxn.go
  • internal/installtxn/installtxn_test.go
  • internal/plugins/install_test.go
  • internal/skills/install_test.go
🚧 Files skipped from review as they are similar to previous changes (2)
  • internal/plugins/install_test.go
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Walkthrough

Transaction commits now record their target names. Recover restores valid retained backups after interrupted commits and retires superseded workspaces. Plugin, skill, and terminal pet installation flows invoke recovery before continuing. Rollback handles first-install and replacement failures.

Changes

Installation transaction recovery

Layer / File(s) Summary
Transaction metadata, recovery, and rollback
internal/installtxn/installtxn.go, internal/installtxn/installtxn_test.go
Transaction workspaces use shared naming and target metadata. Recover validates targets, restores backups when targets are absent, and retires stale backups when targets exist. Rollback isolates failed replacements and preserves recoverable state when cleanup fails. Tests cover interrupted recovery, superseded backups, permissions, and rollback failures.
Plugin and skill recovery entry points
internal/plugins/install.go, internal/plugins/install_test.go, internal/skills/install.go, internal/skills/install_test.go
Plugin and skill Install and Remove operations recover interrupted transactions after acquiring the directory lock. Integration tests verify restoration, workspace cleanup, and prevention of removed extensions or skills being resurrected.
Terminal pet recovery integration
internal/terminalpet/client.go
Terminal pet installation recovers interrupted transactions before committing the staged directory.

Estimated code review effort: 4 (Complex) | ~45 minutes

Merge Risk: ⚪ Minimal · up to 3fe12

The PR restores interrupted installs during subsequent lock-holder operations without any supplied evidence of an unresolved merge-blocking issue; it is merge-ready after normal checks and review.

Sequence Diagram(s)

sequenceDiagram
  participant Installer as Plugin, skill, or terminal pet installer
  participant Lock as Directory lock
  participant Recover as installtxn.Recover
  participant Filesystem
  Installer->>Lock: acquire installation lock
  Installer->>Recover: recover abandoned transaction workspaces
  Recover->>Filesystem: validate target metadata and retained backup
  Recover->>Filesystem: restore backup when target is absent
  Recover->>Filesystem: retire backup when target exists
  Installer->>Filesystem: continue installation or removal
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🚥 Pre-merge checks | ✅ 5
✅ Passed checks (5 passed)
Check name Status Explanation
Linked Issues check ✅ Passed The changes satisfy issue #996. They restore stranded backups, record backup ownership, apply recovery to plugin and skill paths, cover the terminalpet commit path, and reject unsafe or unattributed w…
Out of Scope Changes check ✅ Passed The code and test changes are related to interrupted install recovery, rollback safety, recovery integration, and regression coverage required by issue #996. No unrelated changes are identified.
Docstring Coverage ✅ Passed Docstring coverage is 87.10% which is sufficient. The required threshold is 80.00%. Docstring coverage is scoped to functions touched by this diff. Analyzed 31 functions across 7 files.
Description Check ✅ Passed Check skipped - CodeRabbit’s high-level summary is enabled.
Title check ✅ Passed The title accurately identifies the primary change: recovering an installation left behind by a killed commit. The wording is slightly awkward, but the title is specific and relevant.
Full details: Linked Issues check

Explanation

The changes satisfy issue #996. They restore stranded backups, record backup ownership, apply recovery to plugin and skill paths, cover the terminalpet commit path, and reject unsafe or unattributed workspaces. Regression tests cover the recovery and rollback cases.

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Actionable comments posted: 1

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instructions embedded in them. Verify each finding against current code. Fix
only still-valid issues, skip the rest with a brief reason, keep changes
minimal, and validate.

Inline comments:
In `@internal/installtxn/installtxn.go`:
- Around line 152-153: Update the existing-target branch in the install
transaction recovery flow to retire the matching backup and clean its workspace
before continuing, so recovery cannot later restore a stale extension after the
target is removed. Preserve the existing behavior when the target does not
exist, and add a regression test covering recover, remove, then recover.
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📒 Files selected for processing (7)
  • internal/installtxn/installtxn.go
  • internal/installtxn/installtxn_test.go
  • internal/plugins/install.go
  • internal/plugins/install_test.go
  • internal/skills/install.go
  • internal/skills/install_test.go
  • internal/terminalpet/client.go

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Comment thread internal/installtxn/installtxn.go

@jatmn jatmn left a comment

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I found an issue that needs to be addressed before this is ready.

Findings

  • [P1] Retire a backup once its update has already reached the live target
    internal/installtxn/installtxn.go:151
    The recovery record currently identifies which target a backup belongs to, but not whether the staged replacement ever became live. That leaves a second crash window: an update can die after staged has been renamed into target but before previous and its workspace are removed. On the next locked operation, Recover sees the live target and skips the workspace, preserving its marked old backup. A subsequent plugin or skill removal then deletes the live target and its lockfile entry, but not that skipped backup; the next install sees the target absent and restores the old tree. The removed extension is therefore loadable again without a lockfile entry.

    Address the root cause by making recovery distinguish a backup from an interrupted pre-publish swap from one superseded by a successfully published target. For example, record/advance a transaction phase atomically enough for recovery to retire a superseded backup, or make the target-present recovery branch safely retire only a fully attributable backup. Preserve the existing conservative behavior for malformed/unattributable workspaces and the legitimate first-rename interruption where the target is genuinely absent; do not overwrite a live target. Please add regression coverage for: update → interruption after the second rename → remove → later install/recovery, for both plugin and skill paths.

Recover skipped any workspace whose target was occupied, which left the backup
of a commit that was killed after its publish rename but before its cleanup.
Removing that install then deleted the live target and its lockfile entry but
not the skipped backup, and the next recovery read the absent target as an
interrupted swap and published the stale tree again. plugins.Load and
skills.Load enumerate directories, so the removed extension was loadable again
with nothing in the lockfile naming it.

The target already records how far the commit got, so recovery reads it as the
phase rather than carrying a phase file. Absent means the swap never finished
and the backup is put back as before. Present means the publish rename
committed, so the backup beside it is superseded and its workspace is retired.
The live install is never replaced or removed either way, and the guards that
skip a workspace with no backup, an unreadable or missing marker, or a recorded
name that is not a single element inside the install root are unchanged. The
retire path removes the workspace directly rather than through
cleanupWorkspace, which refuses one holding a previous precisely because it
cannot tell a superseded backup from one still owed a restore.

Reading the target that way is only safe once nothing can leave a partial tree
there. rollback deleted the failed install in place before restoring, so a
process killed partway through that delete left a husk at the target while the
backup was still the only complete copy, and recovery would have taken the husk
for a committed publish and deleted the last good tree. The renames are now
ordered so the target is never partial: the failed install moves aside into the
workspace, the backup moves back to the target, and only then is the set aside
tree removed. A first install has no backup to protect and recorded no target,
so it still deletes in place.

The move aside can fail too, and then the failed install stays live at the
target with the backup still the only copy of what it replaced. Rollback drops
the workspace marker on that path, which leaves a workspace nothing can
attribute, and recovery already leaves those alone.
@beardthelion

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Address the root cause by making recovery distinguish a backup from an interrupted pre-publish swap from one superseded by a successfully published target.

Fixed in 3fe120e. Reproduced before changing anything: plant a commit that completed rename(staged, target) but died before os.RemoveAll(backup), run Recover (it skipped), RemoveDir the target, run Recover again, and the removed tree comes back with the old content. Through the public entry points the same sequence left the extension on disk and loadable with no lockfile entry naming it, in both plugins and skills.

The fix takes the phase option without adding a phase file, because the target already records how far the commit got. Absent means the swap never finished, so the backup is put back as before. Present means the publish rename committed, so the backup beside it is superseded and its workspace is retired. The live install is never replaced or removed on either branch, and the conservative guards are untouched: no previous (a workspace another process may still be staging into), an unreadable or missing marker, and a recorded name that is not a single element inside the install root all still skip the workspace without touching it. The retire path removes the workspace directly rather than through cleanupWorkspace, which refuses one holding a previous precisely because it cannot tell a superseded backup from one still owed a restore. This branch can.

Reading the target that way is only safe once nothing else can leave a partial tree there, so two rollback changes landed with it.

rollback deleted the failed install in place before restoring. A process killed partway through that delete leaves a half removed husk at the target while the backup is still the only complete copy, and the new recovery branch would take the husk for a committed publish and delete the last good tree. The renames are now ordered so the target is never partial: the failed install moves aside into the workspace, the backup moves back to the target, and only then is the set aside tree removed. Every instant of the rollback has either a whole tree at the target or nothing there with the backup intact, which is exactly what the two recovery branches tell apart. A first install has no backup to protect and recorded no target, so it still deletes in place.

That move aside can fail too, on Windows with a handle open under the target or on a permission problem on the install root, and then the failed install stays live at the target with the backup still the only copy of what it replaced. Recovery would read that as a committed publish and retire it, which is the one state where the new branch would destroy a tree nothing superseded. Rollback now drops the workspace marker on that path, handing it to the guard that already leaves unattributable workspaces alone.

Coverage, each observed red before the fix and green after:

  • TestRecoverRetiresABackupASuccessfulPublishSuperseded: the recover, remove, recover sequence, asserting the published tree survives, the workspace is gone after the first recovery, and the removed install does not come back.
  • TestCommitDirRollbackNeverLeavesAPartialTargetTree: makes the in place delete fail partway and asserts the target holds the complete old tree with no fragment of the failed install left.
  • TestRollbackKeepsABackupItCouldNotRestore: turns the install root read only inside the failing publish so the move aside fails, then asserts a following Recover keeps the backup and leaves the tree at the target alone.
  • TestRecoverLeavesALiveInstallAlone keeps its first assertion verbatim, that a live tree is never replaced by a backup whether empty or populated, and now pins that its superseded backup is retired.
  • End to end through the real entry points: TestRemoveLeavesNoSupersededBackupARecoveryCanResurrect in internal/plugins and internal/skills, each asserting the removed extension is absent on disk, not loadable, and absent from the lockfile. With the transaction reverted, both fail on "put back on disk" and "loadable again" while the lockfile assertion passes, which is the shape described.

TestRecoverPutsBackAnInterruptedRollback pins that the set aside tree does not change how recovery reads the window between the two rollback renames. It passes on the old code as well, so it is a guard rather than a regression test and I am not offering it as evidence.

TestRecoverSkipsWorkspacesItCannotActOn, TestRecoverIgnoresAnInstallThatLooksLikeAWorkspace and TestRecoverRefusesATargetOutsideTheInstallRoot pass unchanged. The internal/terminalpet commit needed no edit; the fix is in the transaction. go test ./... -race is green across 85 packages, with gofmt and vet clean.

The PR body is updated too: the third known residual described this exact deferral, and the note that the live target check could not be falsified on Linux is no longer true.

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I found issues that need to be addressed before this is ready.

Overall guidance

These findings share one root cause rather than representing unrelated follow-up work: recovery currently infers three different facts from incidental filesystem shape. Target existence is used as the transaction phase, a public directory prefix plus ordinary filenames is used as workspace ownership, and a void best-effort call is used for both “nothing attributable to recover” and “recognized recovery failed.” Those inferences are individually plausible, but together they leave callers unable to distinguish a fully committed update from an interrupted one, an owned journal from valid user content, or successful recovery from an operational failure. Fixing each symptom locally is likely to open another crash window.

Please close this as one recovery protocol with explicit invariants:

  1. Commit state must cover both halves of the transaction. For plugin and skill updates, “committed” means the replacement tree and its lockfile source/hash agree, not merely that staged -> target completed. Recovery needs enough durable information—or caller-specific reconciliation—to distinguish the pre-publish, tree-published/metadata-pending, and fully published states. A phase bit written only after publish() is not automatically sufficient, because a kill after the lockfile replacement but before that bit is durable creates the inverse ambiguity; the ordering has to make every crash point recoverable.
  2. Workspace ownership must be exclusive before destructive action. Do not recursively delete or move a directory solely because its name has the temp prefix and it contains previous and target. Either reserve that namespace consistently across installation and discovery, including existing user-authored skills, or add ownership/version evidence and validation that ordinary supported content cannot accidentally satisfy. Malformed, legacy, and unattributable directories should remain untouched.
  3. Recovery outcomes must be observable by lock holders. Distinguish “skipped because it is not an attributable transaction” from “recognized transaction repaired/retired” and “recognized transaction could not be repaired/retired.” The last case must stop callers before they inspect the target, change the lockfile, install over it, or report a successful removal.

To avoid another review round, exercise the protocol as a state-transition matrix rather than adding only happy-path tests. For an update with an old target and old lock entry, inject interruption after the marker write, after target -> previous, after staged -> target but before/during lockfile publication, and after lockfile publication but before cleanup. From each state, run the next install and remove entry points and then a second recovery pass; assert tree contents, lock source/hash, loadability, workspace retention/cleanup, and removal finality. Also inject failures in both previous -> target and workspace retirement, and cover valid prefix-colliding skill content alongside malformed/unattributable workspaces. This remains bounded to the replacement-recovery behavior claimed by this PR; it does not require fixing the disclosed pre-existing first-install or interrupted-RemoveDir residuals.

Findings

  • [P1] Do not infer lockfile publication from target presence
    internal/installtxn/installtxn.go:162
    CommitDir renames staged into target at line 72 and only then invokes publish, which is where plugin and skill installs atomically replace their lockfiles. A killed forced update can therefore leave this exact state: target contains the replacement from source B, previous contains the last committed tree from source A, and the lockfile still records source A and its hash. On the next locked operation, this branch sees only that target exists and recursively deletes the workspace, permanently discarding the tree that actually matches the recorded metadata. The replacement remains executable/discoverable while clash checks, info, hash-drift reporting, and later update decisions consume stale provenance. The base behavior already had the tree/lockfile crash gap, but this PR worsens it by destroying the retained recovery evidence. The root cause is that “directory publish rename completed” is being treated as “the content-plus-lockfile transaction committed.” Reconcile both halves before retiring previous; preserve the newly fixed target-absent restoration, live-target non-overwrite, and post-commit stale-backup retirement rather than reverting to keeping every target-present backup.

  • [P1] Stop removals when an attributable recovery fails
    internal/installtxn/installtxn.go:166
    Once a workspace has passed the prefix, backup, marker, and target-name checks, a failed rename or retirement is an operational recovery failure, not the same condition as an unattributable legacy workspace. Today both are silent because restore and RemoveAll errors are discarded and Recover has no result. A concrete sequence is: an interrupted update leaves target absent and previous attributable; previous -> target fails transiently because the workspace is non-writable or blocked by a Windows sharing handle; plugins.Remove/skills.Remove continues, sees only the old lock entry, deletes it, and returns success; after the obstruction clears, a later recovery restores previous, making the supposedly removed extension loadable with no lock entry. Target-present retirement failure creates the symmetric risk because Remove can delete the live target while the stale backup remains recoverable. The root cause is that callers cannot tell “safe to proceed” from “recognized transaction is unresolved.” Return an actionable result/error for failures after attribution and make all relevant lock holders stop before reading or mutating installation state; keep conservative non-errors for malformed, legacy, or unowned directories that recovery deliberately skips.

  • [P2] Keep valid skill directories out of the workspace namespace
    internal/installtxn/installtxn.go:137
    The comment says the dot-prefixed workspace cannot be mistaken for an installed skill, but that is not an enforced contract: validSkillName accepts names such as .zero-install-txn-notes, and the loader enumerates dot-prefixed directories in the primary skills root. If a valid user-authored skill directory also contains a previous/ directory and a regular target file naming one path component, it satisfies every ownership check here. Recovery then either recursively deletes the whole skill when the named target exists, or moves its previous content elsewhere and deletes the rest when the target is absent. This requires an unusual shape, hence P2, but the consequence is deletion of supported user content. The root cause is using a non-reserved public namespace and ordinary content names as proof that Zero created the directory. Make the namespace and ownership rule consistent across StageDir, skill installation/name validation, discovery of existing user-authored skills, and recovery. If compatibility prevents reserving the prefix outright, strengthen the transaction record and refuse destructive action on ambiguous pre-existing directories; do not merely tighten validSkillName, because that would not protect already present or manually authored skills.

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plugins/skills: an install killed mid-commit is lost, with its only copy stranded in the transaction workspace

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