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Stop preprocess deleting the interim directory - #220
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Closes #135.
preprocesskeeps its intermediate files in a fresh subdirectory of--interim_dirand removes only that subdirectory, whether it finishes, fails or stops early with--channel-means-only.io.interim_workdir, a context manager that yields a temporary directory insideinterim_dir. It createsinterim_dirif missing and removes it afterwards only if it created it and it is left empty.run_preprocessingruns everything from binning to the HDF5 write insideio.interim_workdir, replacingshutil.rmtree(interim_dir). Most of its diff is re-indentation.tests/test_io.pyandtests/test_preprocessing.pyand a changelog entry.