CellProfiling
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HPA-competition-solutions
HPA-competition-solutions PublicTeam original solutions for the Human Protein Atlas image classification competition
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ProtiCelli
ProtiCelli PublicGroup-wise release of ProtiCelli, including core code deveplopment.
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Repositories
- hpaseg Public
HPAseg is a batch segmentation and single-cell quantification tool for HPA-style brightfield IHC images (RGB images stained with hematoxylin for nuclei and DAB for the target protein)
CellProfiling/hpaseg’s past year of commit activity - ell_espace Public
Collection of scripts used to annotate and analyze spatial proteomics data for the ESPACE project (non-diseased pancreatic tissue)
CellProfiling/ell_espace’s past year of commit activity - HPA_Convert_Sp8_To_OMETIF Public
FIJI plugin that allows to convert the ome.tif files exported from the 3D viewer in Leica's LASX (Confocal Microscope DMi8-Sp8 or Stellaris 8) to metadata-rich .ome.tif files suitable for upload to the Human Protein Atlas' LIMS.
CellProfiling/HPA_Convert_Sp8_To_OMETIF’s past year of commit activity
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