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feat(baam): add Folklore Clinical Variant Interpretation MCP #134

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181c025
feat(baam): add Folklore Clinical Variant Interpretation MCP
vladimir-mitev Aug 26, 2026
dcfd48c
docs: update Folklore MCP extension to 1.4.0
vladimir-mitev Aug 27, 2026
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24 changes: 24 additions & 0 deletions landing/baam.html
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Expand Up @@ -876,6 +876,30 @@ <h3>NCBIAgent</h3>
</div>
</div>

<!-- Folklore Clinical Variant Interpretation MCP -->
<div class="ext-card" data-license="Apache-2.0">
<div class="ext-card-header">
<div class="icon-tile">
<svg class="icon" viewBox="0 0 24 24"><path d="M4 4h16v16H4z"/><path d="M8 8h8M8 12h8M8 16h5"/></svg>
</div>
<div class="ext-meta">
<h3>Folklore Clinical Variant Interpretation MCP</h3>
<div class="ext-org">Helena Bioinformatics · v1.4.0</div>
</div>
<a href="https://github.com/helena-bioinformatics/folklore-mcp" target="_blank" class="ext-gh-link" title="View on GitHub">
<svg class="icon" width="15" height="15" viewBox="0 0 24 24" fill="currentColor" stroke="none"><path d="M12 2C6.48 2 2 6.48 2 12c0 4.42 2.87 8.17 6.84 9.49.5.09.68-.22.68-.48v-1.7c-2.78.6-3.37-1.34-3.37-1.34-.45-1.16-1.11-1.47-1.11-1.47-.91-.62.07-.61.07-.61 1 .07 1.53 1.03 1.53 1.03.9 1.52 2.34 1.08 2.91.83.09-.65.35-1.08.63-1.33-2.22-.25-4.55-1.11-4.55-4.94 0-1.09.39-1.98 1.03-2.68-.1-.25-.45-1.27.1-2.64 0 0 .84-.27 2.75 1.02A9.56 9.56 0 0 1 12 6.8c.85 0 1.71.11 2.51.33 1.91-1.29 2.75-1.02 2.75-1.02.55 1.37.2 2.39.1 2.64.64.7 1.59 1.03 2.68 1.03 3.84 0 4.68-2.34 4.93-4.57.36.31.68.92.68 1.85v2.74c0 .27.18.58.69.48A10.01 10.01 0 0 0 22 12c0-5.52-4.48-10-10-10z"/></svg>
</a>
</div>
<p class="ext-desc">Classifies and interprets one supported public GRCh38 germline SNV or simple indel under ACMG/AMP, with structured evidence, provenance, variant-linked literature, publication details, and semantic biomedical literature search. Read-only; accepts no patient or private case data. Results require qualified professional review and are not a diagnosis or treatment recommendation.</p>
<div class="ext-footer">
<div class="ext-tags"><span class="tag public" data-privacy-badge>Public</span><span class="tag mcp">MCP</span><span class="tag">Variants</span><span class="tag">Literature</span><span class="tag">ACMG/AMP</span><span class="tag">Apache-2.0</span></div>
<a href="https://github.com/helena-bioinformatics/folklore-mcp/releases/download/folklore-biorouter-v1.4.0/folklore-clinical-variant-interpretation-mcp.brxt" class="brxt-chip">
<svg class="icon icon-sm" viewBox="0 0 24 24"><path d="M21 15v4a2 2 0 0 1-2 2H5a2 2 0 0 1-2-2v-4"/><polyline points="7,10 12,15 17,10"/><line x1="12" y1="15" x2="12" y2="3"/></svg>
.brxt
</a>
</div>
</div>

<!-- ClinicalVariantAgent -->
<div class="ext-card" data-license="Apache-2.0">
<div class="ext-card-header">
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19 changes: 19 additions & 0 deletions landing/registry.json
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Expand Up @@ -330,6 +330,25 @@
"license": "Apache-2.0",
"privacy": "public"
},
{
"id": "folklore-clinical-variant-interpretation-mcp",
"name": "Folklore Clinical Variant Interpretation MCP",
"organization": "Helena Bioinformatics",
"version": "v1.4.0",
"description": "Classifies and interprets one supported public GRCh38 germline SNV or simple indel under ACMG/AMP, with structured evidence, provenance, variant-linked literature, publication details, and semantic biomedical literature search. Read-only; accepts no patient or private case data. Results require qualified professional review and are not a diagnosis or treatment recommendation.",
"tags": [
"MCP",
"Variants",
"Literature",
"ACMG/AMP",
"Apache-2.0"
],
"github": "https://github.com/helena-bioinformatics/folklore-mcp",
"download": "https://github.com/helena-bioinformatics/folklore-mcp/releases/download/folklore-biorouter-v1.4.0/folklore-clinical-variant-interpretation-mcp.brxt",
"filename": "folklore-clinical-variant-interpretation-mcp.brxt",
"license": "Apache-2.0",
"privacy": "public"
},
{
"id": "clinicalvariantagent",
"name": "ClinicalVariantAgent",
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19 changes: 19 additions & 0 deletions ui/desktop/src/components/baam/registry.fallback.json
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Original file line number Diff line number Diff line change
Expand Up @@ -330,6 +330,25 @@
"license": "Apache-2.0",
"privacy": "public"
},
{
"id": "folklore-clinical-variant-interpretation-mcp",
"name": "Folklore Clinical Variant Interpretation MCP",
"organization": "Helena Bioinformatics",
"version": "v1.4.0",
"description": "Classifies and interprets one supported public GRCh38 germline SNV or simple indel under ACMG/AMP, with structured evidence, provenance, variant-linked literature, publication details, and semantic biomedical literature search. Read-only; accepts no patient or private case data. Results require qualified professional review and are not a diagnosis or treatment recommendation.",
"tags": [
"MCP",
"Variants",
"Literature",
"ACMG/AMP",
"Apache-2.0"
],
"github": "https://github.com/helena-bioinformatics/folklore-mcp",
"download": "https://github.com/helena-bioinformatics/folklore-mcp/releases/download/folklore-biorouter-v1.4.0/folklore-clinical-variant-interpretation-mcp.brxt",
"filename": "folklore-clinical-variant-interpretation-mcp.brxt",
"license": "Apache-2.0",
"privacy": "public"
},
{
"id": "clinicalvariantagent",
"name": "ClinicalVariantAgent",
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