Agentic OS v1 — runnable foundation (daemon + dashboard + _os seed)

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What this is

Step 1–6 of the agreed build order, as one reviewable foundation. Runnable today.

Backend (.infra/backend/) — single Python process (ADR-0001)

• yaml_io.py — load/dump + freshness stamping. Simple writes, git is recovery (Decisions Fix structural mismatches 16426321294777757845 #2).
• sync.py — sync engine: scans entities, maintains fill_queue (hybrid brain pre-fill, feat: establish pipeline system architecture and phase documentation #5), rolls up mission + toolbox metrics, rebuilds the index.
• app.py — Starlette (fix: structural mismatches in workspace directories #1): dashboard, panel fragments, /api/toggle, /agent/say, /events (SSE), background sync loop honoring sync_daemon.
• requirements.txt, README.md.

Frontend (.infra/frontend/) — htmx + Alpine + Cytoscape + SSE (#8, #9)

• 3-section layout + persistent top bar (project switcher) + bottom toolbox dock.
• Center: PLANNING (top) / EXECUTION (bottom) mission cards with filter; click → floating draggable mission window.
• Left: brain map (65%) + inbox/gateway map (35%) via Cytoscape.
• Right: editable board.md (top) + runtime.yaml (bottom).
• Floating agent-output-only chat window, minimizes to a rounded orb, auto-pops on new agent message over SSE (refactor: autonomous workspace directory restructuring #4).

Seed (schema-shaped)

• config.yaml, index.yaml, AGENTS.md (boot pointer + aspects + turn discipline + readiness gate).
• _os/ entity: board, runtime (with fill_queue, dynamic pillars, evolution_objectives), missions (standard/research/evolution buckets), toolboxes, inbox (tracks .gateway/ pillar→group items + processed evolutions), os_prompts + 00_boot-Identity.md.

Decisions honored

• fix: structural mismatches in workspace directories #1 Starlette · Fix structural mismatches 16426321294777757845 #2 free writes + git recovery · refactor: autonomous workspace directory restructuring #4 SSE chat · feat: establish pipeline system architecture and phase documentation #5 hybrid fill_queue · refactor: finalize autonomous workspace directory restructuring #7 readiness gate documented · chore: add 24 maintenance and refactoring goals to BOARD.md backlog #8 htmx/Alpine · Restructure repo and implement state tracking #9 Cytoscape · docs(pipeline): apply feature-level architecture and new cascading discovery logic #10 inbox .gateway/ pillar→group + fixed aspects (Architecture/Capabilities/Monetization) vs dynamic pillars · chore(pipeline): restructure pipeline folders and migrate algerian-ec… #13 next-actions turn discipline.

Run

python -m venv .stash/.venv/venv && . .stash/.venv/venv/bin/activate
pip install -r .infra/backend/requirements.txt
python .infra/backend/app.py   # http://127.0.0.1:8000

Not done yet (next passes)

• Board-save endpoint (client stubs the intent).
• Full mission-detail view in the floating window (currently opens with a placeholder body).
• Daemon-side evolution readiness enforcement (gate is documented + schema'd; not yet enforced in code).
• Project creation flow (agent asks for details → drafts project file, Update sync scripts and indexing system documentation #11).
• Toolbox activation writes, research/evolution workflow logic, MCP bridge (Fix structural mismatches 16426321294777757845 #3 later).
• Cosmetic: a few UI glyphs use escaped unicode literals.

Merge or review-comment and I'll keep going pass by pass.

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