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The TODO is now done, and can be removed
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phylogen.md

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@@ -74,8 +74,7 @@ import tsconvert # used for reading tree sequences from different formats
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# example code reading in a large file, timed
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# Or read smaller trees from strings (here we create a tree spanning 1000 genomic units)
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# Todo: add sequence length: https://github.com/tskit-dev/tsconvert/issues/40
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ts = tsconvert.from_newick("(A:6,((B:1,C:1):2,(D:2,E:2):1):3);", span=100)
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ts = tsconvert.from_newick("(A:6,((B:1,C:1):2,(D:2,E:2):1):3);", span=1000)
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```
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The "succinct tree sequence" format used by `tskit` can also store mutations

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