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remove cache from canopy_height chunk
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traits/03-access-r-traits.Rmd

Lines changed: 3 additions & 3 deletions
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@@ -61,7 +61,7 @@ Notice all of the arguments that the `betydb_query` function requires? We can ch
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```{r set-up, echo = TRUE}
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```{r 03-set-up, echo = TRUE}
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options(betydb_key = readLines('.betykey', warn = FALSE),
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betydb_url = "https://terraref.ncsa.illinois.edu/bety/",
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betydb_api_version = 'v1')
@@ -78,14 +78,14 @@ sorghum_info <- betydb_query(table = 'species',
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### Time series of height
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Now let's query some trait data.
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```{r canopy_height, echo = TRUE, results = FALSE, cache = TRUE}
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```{r canopy_height, echo = TRUE, results = FALSE}
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sorghum_height <- betydb_query(table = 'search',
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trait = "canopy_height",
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sitename = "~Season 6",
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limit = 'none')
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```
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```{r}
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```{r plot_height}
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ggplot(data = sorghum_height,
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aes(x = lubridate::yday(lubridate::ymd_hms(raw_date)), y = mean)) +
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geom_point(size = 0.5, position = position_jitter(width = 0.1)) +

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