From cb3bd1a82c26ea6294253ddb8690018cada144c9 Mon Sep 17 00:00:00 2001 From: Philipp Burckhardt Date: Wed, 26 Aug 2026 11:46:00 -0500 Subject: [PATCH 1/5] feat: add C implementation for `stats/base/dists/gamma/quantile` This commit adds a native C implementation for the gamma distribution quantile function. The implementation delegates to `gammaincinv` which already has C support. --- ## AI Assistance Disclosure This commit was drafted with the help of AI (Claude). A human reviewed and approved all changes before merging. Co-Authored-By: Claude Opus 5 (1M context) --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown_pkg_readmes status: na - task: lint_markdown_docs status: na - task: lint_markdown status: na - task: lint_package_json status: passed - task: lint_repl_help status: na - task: lint_javascript_src status: passed - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: passed - task: lint_javascript_benchmarks status: passed - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: passed - task: lint_c_examples status: passed - task: lint_c_benchmarks status: passed - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: passed - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- .../stats/base/dists/gamma/quantile/README.md | 85 ++++++++ .../quantile/benchmark/benchmark.native.js | 73 +++++++ .../dists/gamma/quantile/benchmark/c/Makefile | 146 +++++++++++++ .../gamma/quantile/benchmark/c/benchmark.c | 142 +++++++++++++ .../base/dists/gamma/quantile/binding.gyp | 170 +++++++++++++++ .../dists/gamma/quantile/examples/c/Makefile | 146 +++++++++++++ .../dists/gamma/quantile/examples/c/example.c | 42 ++++ .../base/dists/gamma/quantile/include.gypi | 53 +++++ .../stdlib/stats/base/dists/gamma/quantile.h | 38 ++++ .../base/dists/gamma/quantile/lib/native.js | 72 +++++++ .../base/dists/gamma/quantile/manifest.json | 79 +++++++ .../base/dists/gamma/quantile/package.json | 3 + .../base/dists/gamma/quantile/src/Makefile | 70 +++++++ .../base/dists/gamma/quantile/src/addon.c | 22 ++ .../base/dists/gamma/quantile/src/main.c | 52 +++++ .../dists/gamma/quantile/test/test.native.js | 193 ++++++++++++++++++ 16 files changed, 1386 insertions(+) create mode 100644 lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/benchmark.native.js create mode 100644 lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/c/Makefile create mode 100644 lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/c/benchmark.c create mode 100644 lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/binding.gyp create mode 100644 lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/examples/c/Makefile create mode 100644 lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/examples/c/example.c create mode 100644 lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/include.gypi create mode 100644 lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/include/stdlib/stats/base/dists/gamma/quantile.h create mode 100644 lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/lib/native.js create mode 100644 lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/manifest.json create mode 100644 lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/src/Makefile create mode 100644 lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/src/addon.c create mode 100644 lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/src/main.c create mode 100644 lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/test/test.native.js diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/README.md b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/README.md index 0887619f47db..abb513815569 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/README.md +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/README.md @@ -150,6 +150,91 @@ logEachMap( 'p: %0.4f, α: %0.4f, β: %0.4f, Q(p;α,β): %0.4f', p, alpha, beta, + + +
+ +
+ +
+ + + +
+ +## C APIs + +### Usage + +```c +#include "stdlib/stats/base/dists/gamma/quantile.h" +``` + +#### stdlib_base_dists_gamma_quantile( p, alpha, beta ) + +Evaluates the [quantile function][quantile-function] for a [gamma][gamma-distribution] distribution with parameters `alpha` (shape parameter) and `beta` (rate parameter). + +```c +double out = stdlib_base_dists_gamma_quantile( 0.8, 2.0, 1.0 ); +// returns ~2.994 + +out = stdlib_base_dists_gamma_quantile( 0.5, 4.0, 2.0 ); +// returns ~1.836 +``` + +The function accepts the following arguments: + +- **p**: `[in] double` input probability. +- **alpha**: `[in] double` shape parameter. +- **beta**: `[in] double` rate parameter. + +```c +double stdlib_base_dists_gamma_quantile( const double p, const double alpha, const double beta ); +``` + +
+ + + +
+ +### Examples + +```c +#include "stdlib/stats/base/dists/gamma/quantile.h" +#include +#include + +static double random_uniform( double min, double max ) { + double scale = rand() / (double) RAND_MAX; + return min + ( scale * ( max - min ) ); +} + +int main( void ) { + double alpha; + double beta; + double p; + double y; + int i; + + for ( i = 0; i < 25; i++ ) { + p = random_uniform( 0.0, 1.0 ); + alpha = random_uniform( 0.1, 5.0 ); + beta = random_uniform( 0.1, 5.0 ); + y = stdlib_base_dists_gamma_quantile( p, alpha, beta ); + printf( "p: %lf, α: %lf, β: %lf, Q(p;α,β): %lf\n", p, alpha, beta, y ); + } +} +``` + +
+ + + +
+ + +
diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/benchmark.native.js b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/benchmark.native.js new file mode 100644 index 000000000000..27dbc235cf79 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/benchmark.native.js @@ -0,0 +1,73 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2026 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +'use strict'; + +// MODULES // + +var resolve = require( 'path' ).resolve; +var bench = require( '@stdlib/bench' ); +var uniform = require( '@stdlib/random/array/uniform' ); +var format = require( '@stdlib/string/format' ); +var isnan = require( '@stdlib/math/base/assert/is-nan' ); +var EPS = require( '@stdlib/constants/float64/eps' ); +var tryRequire = require( '@stdlib/utils/try-require' ); +var pkg = require( './../package.json' ).name; + + +// VARIABLES // + +var quantile = tryRequire( resolve( __dirname, './../lib/native.js' ) ); +var opts = { + 'skip': ( quantile instanceof Error ) +}; + + +// MAIN // + +bench( format( '%s::native', pkg ), opts, function benchmark( b ) { + var alpha; + var beta; + var p; + var y; + var i; + + p = uniform( 100, 0.0, 1.0, { + 'dtype': 'float64' + }); + alpha = uniform( 100, EPS, 100.0, { + 'dtype': 'float64' + }); + beta = uniform( 100, EPS, 100.0, { + 'dtype': 'float64' + }); + + b.tic(); + for ( i = 0; i < b.iterations; i++ ) { + y = quantile( p[ i % p.length ], alpha[ i % alpha.length ], beta[ i % beta.length ] ); + if ( isnan( y ) ) { + b.fail( 'should not return NaN' ); + } + } + b.toc(); + if ( isnan( y ) ) { + b.fail( 'should not return NaN' ); + } + b.pass( 'benchmark finished' ); + b.end(); +}); diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/c/Makefile b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/c/Makefile new file mode 100644 index 000000000000..979768abbcec --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/c/Makefile @@ -0,0 +1,146 @@ +#/ +# @license Apache-2.0 +# +# Copyright (c) 2026 The Stdlib Authors. +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. +#/ + +# VARIABLES # + +ifndef VERBOSE + QUIET := @ +else + QUIET := +endif + +# Determine the OS ([1][1], [2][2]). +# +# [1]: https://en.wikipedia.org/wiki/Uname#Examples +# [2]: http://stackoverflow.com/a/27776822/2225624 +OS ?= $(shell uname) +ifneq (, $(findstring MINGW,$(OS))) + OS := WINNT +else +ifneq (, $(findstring MSYS,$(OS))) + OS := WINNT +else +ifneq (, $(findstring CYGWIN,$(OS))) + OS := WINNT +else +ifneq (, $(findstring Windows_NT,$(OS))) + OS := WINNT +endif +endif +endif +endif + +# Define the program used for compiling C source files: +ifdef C_COMPILER + CC := $(C_COMPILER) +else + CC := gcc +endif + +# Define the command-line options when compiling C files: +CFLAGS ?= \ + -std=c99 \ + -O3 \ + -Wall \ + -pedantic + +# Determine whether to generate position independent code ([1][1], [2][2]). +# +# [1]: https://gcc.gnu.org/onlinedocs/gcc/Code-Gen-Options.html#Code-Gen-Options +# [2]: http://stackoverflow.com/questions/5311515/gcc-fpic-option +ifeq ($(OS), WINNT) + fPIC ?= +else + fPIC ?= -fPIC +endif + +# List of includes (e.g., `-I /foo/bar -I /beep/boop/include`): +INCLUDE ?= + +# List of source files: +SOURCE_FILES ?= + +# List of libraries (e.g., `-lopenblas -lpthread`): +LIBRARIES ?= + +# List of library paths (e.g., `-L /foo/bar -L /beep/boop`): +LIBPATH ?= + +# List of C targets: +c_targets := benchmark.out + + +# RULES # + +#/ +# Compiles source files. +# +# @param {string} [C_COMPILER] - C compiler (e.g., `gcc`) +# @param {string} [CFLAGS] - C compiler options +# @param {(string|void)} [fPIC] - compiler flag determining whether to generate position independent code (e.g., `-fPIC`) +# @param {string} [INCLUDE] - list of includes (e.g., `-I /foo/bar -I /beep/boop/include`) +# @param {string} [SOURCE_FILES] - list of source files +# @param {string} [LIBPATH] - list of library paths (e.g., `-L /foo/bar -L /beep/boop`) +# @param {string} [LIBRARIES] - list of libraries (e.g., `-lopenblas -lpthread`) +# +# @example +# make +# +# @example +# make all +#/ +all: $(c_targets) + +.PHONY: all + +#/ +# Compiles C source files. +# +# @private +# @param {string} CC - C compiler (e.g., `gcc`) +# @param {string} CFLAGS - C compiler options +# @param {(string|void)} fPIC - compiler flag determining whether to generate position independent code (e.g., `-fPIC`) +# @param {string} INCLUDE - list of includes (e.g., `-I /foo/bar`) +# @param {string} SOURCE_FILES - list of source files +# @param {string} LIBPATH - list of library paths (e.g., `-L /foo/bar`) +# @param {string} LIBRARIES - list of libraries (e.g., `-lopenblas`) +#/ +$(c_targets): %.out: %.c + $(QUIET) $(CC) $(CFLAGS) $(fPIC) $(INCLUDE) -o $@ $(SOURCE_FILES) $< $(LIBPATH) -lm $(LIBRARIES) + +#/ +# Runs compiled benchmarks. +# +# @example +# make run +#/ +run: $(c_targets) + $(QUIET) ./$< + +.PHONY: run + +#/ +# Removes generated files. +# +# @example +# make clean +#/ +clean: + $(QUIET) -rm -f *.o *.out + +.PHONY: clean diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/c/benchmark.c b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/c/benchmark.c new file mode 100644 index 000000000000..8ee255cf1ab0 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/c/benchmark.c @@ -0,0 +1,142 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2026 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +#include "stdlib/stats/base/dists/gamma/quantile.h" +#include +#include +#include +#include +#include + +#define NAME "gamma-quantile" +#define ITERATIONS 1000000 +#define REPEATS 3 + +/** +* Prints the TAP version. +*/ +static void print_version( void ) { + printf( "TAP version 13\n" ); +} + +/** +* Prints the TAP summary. +* +* @param total total number of tests +* @param passing total number of passing tests +*/ +static void print_summary( int total, int passing ) { + printf( "#\n" ); + printf( "1..%d\n", total ); // TAP plan + printf( "# total %d\n", total ); + printf( "# pass %d\n", passing ); + printf( "#\n" ); + printf( "# ok\n" ); +} + +/** +* Prints benchmarks results. +* +* @param elapsed elapsed time in seconds +*/ +static void print_results( double elapsed ) { + double rate = (double)ITERATIONS / elapsed; + printf( " ---\n" ); + printf( " iterations: %d\n", ITERATIONS ); + printf( " elapsed: %0.9f\n", elapsed ); + printf( " rate: %0.9f\n", rate ); + printf( " ...\n" ); +} + +/** +* Returns a clock time. +* +* @return clock time +*/ +static double tic( void ) { + struct timeval now; + gettimeofday( &now, NULL ); + return (double)now.tv_sec + (double)now.tv_usec / 1.0e6; +} + +/** +* Generates a random number on the interval [min,max). +* +* @param min minimum value (inclusive) +* @param max maximum value (exclusive) +* @return random number +*/ +static double random_uniform( const double min, const double max ) { + double v = (double)rand() / ( (double)RAND_MAX + 1.0 ); + return min + ( v * ( max - min ) ); +} + +/** +* Runs a benchmark. +* +* @return elapsed time in seconds +*/ +static double benchmark( void ) { + double elapsed; + double alpha[ 100 ]; + double beta[ 100 ]; + double p[ 100 ]; + double y; + double t; + int i; + + for ( i = 0; i < 100; i++ ) { + alpha[ i ] = random_uniform( 0.1, 100.0 ); + beta[ i ] = random_uniform( 0.1, 100.0 ); + p[ i ] = random_uniform( 0.0, 1.0 ); + } + + t = tic(); + for ( i = 0; i < ITERATIONS; i++ ) { + y = stdlib_base_dists_gamma_quantile( p[ i % 100 ], alpha[ i % 100 ], beta[ i % 100 ] ); + if ( y != y ) { + printf( "should not return NaN\n" ); + break; + } + } + elapsed = tic() - t; + if ( y != y ) { + printf( "should not return NaN\n" ); + } + return elapsed; +} + +/** +* Main execution sequence. +*/ +int main( void ) { + double elapsed; + int i; + + // Use the current time to seed the random number generator: + srand( time( NULL ) ); + + print_version(); + for ( i = 0; i < REPEATS; i++ ) { + printf( "# c::%s\n", NAME ); + elapsed = benchmark(); + print_results( elapsed ); + printf( "ok %d benchmark finished\n", i + 1 ); + } + print_summary( REPEATS, REPEATS ); +} diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/binding.gyp b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/binding.gyp new file mode 100644 index 000000000000..0d6508a12e99 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/binding.gyp @@ -0,0 +1,170 @@ +# @license Apache-2.0 +# +# Copyright (c) 2026 The Stdlib Authors. +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + +# A `.gyp` file for building a Node.js native add-on. +# +# [1]: https://gyp.gsrc.io/docs/InputFormatReference.md +# [2]: https://gyp.gsrc.io/docs/UserDocumentation.md +{ + # List of files to include in this file: + 'includes': [ + './include.gypi', + ], + + # Define variables to be used throughout the configuration for all targets: + 'variables': { + # Target name should match the add-on export name: + 'addon_target_name%': 'addon', + + # Set variables based on the host OS: + 'conditions': [ + [ + 'OS=="win"', + { + # Define the object file suffix: + 'obj': 'obj', + }, + { + # Define the object file suffix: + 'obj': 'o', + } + ], # end condition (OS=="win") + ], # end conditions + }, # end variables + + # Define compile targets: + 'targets': [ + + # Target to generate an add-on: + { + # The target name should match the add-on export name: + 'target_name': '<(addon_target_name)', + + # Define dependencies: + 'dependencies': [], + + # Define directories which contain relevant include headers: + 'include_dirs': [ + # Local include directory: + '<@(include_dirs)', + ], + + # List of source files: + 'sources': [ + '<@(src_files)', + ], + + # Settings which should be applied when a target's object files are used as linker input: + 'link_settings': { + # Define libraries: + 'libraries': [ + '<@(libraries)', + ], + + # Define library directories: + 'library_dirs': [ + '<@(library_dirs)', + ], + }, + + # C/C++ compiler flags: + 'cflags': [ + # Enable commonly used warning options: + '-Wall', + + # Aggressive optimization: + '-O3', + ], + + # C specific compiler flags: + 'cflags_c': [ + # Specify the C standard to which a program is expected to conform: + '-std=c99', + ], + + # C++ specific compiler flags: + 'cflags_cpp': [ + # Specify the C++ standard to which a program is expected to conform: + '-std=c++11', + ], + + # Linker flags: + 'ldflags': [], + + # Apply conditions based on the host OS: + 'conditions': [ + [ + 'OS=="mac"', + { + # Linker flags: + 'ldflags': [ + '-undefined dynamic_lookup', + '-Wl,-no-pie', + '-Wl,-search_paths_first', + ], + }, + ], # end condition (OS=="mac") + [ + 'OS!="win"', + { + # C/C++ flags: + 'cflags': [ + # Generate platform-independent code: + '-fPIC', + ], + }, + ], # end condition (OS!="win") + ], # end conditions + }, # end target <(addon_target_name) + + # Target to copy a generated add-on to a standard location: + { + 'target_name': 'copy_addon', + + # Declare that the output of this target is not linked: + 'type': 'none', + + # Define dependencies: + 'dependencies': [ + # Require that the add-on be generated before building this target: + '<(addon_target_name)', + ], + + # Define a list of actions: + 'actions': [ + { + 'action_name': 'copy_addon', + 'message': 'Copying addon...', + + # Explicitly list the inputs in the command-line invocation below: + 'inputs': [], + + # Declare the expected outputs: + 'outputs': [ + '<(addon_output_dir)/<(addon_target_name).node', + ], + + # Define the command-line invocation: + 'action': [ + 'cp', + '<(PRODUCT_DIR)/<(addon_target_name).node', + '<(addon_output_dir)/<(addon_target_name).node', + ], + }, + ], # end actions + }, # end target copy_addon + ], # end targets +} diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/examples/c/Makefile b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/examples/c/Makefile new file mode 100644 index 000000000000..c8f8e9a1517b --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/examples/c/Makefile @@ -0,0 +1,146 @@ +#/ +# @license Apache-2.0 +# +# Copyright (c) 2026 The Stdlib Authors. +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. +#/ + +# VARIABLES # + +ifndef VERBOSE + QUIET := @ +else + QUIET := +endif + +# Determine the OS ([1][1], [2][2]). +# +# [1]: https://en.wikipedia.org/wiki/Uname#Examples +# [2]: http://stackoverflow.com/a/27776822/2225624 +OS ?= $(shell uname) +ifneq (, $(findstring MINGW,$(OS))) + OS := WINNT +else +ifneq (, $(findstring MSYS,$(OS))) + OS := WINNT +else +ifneq (, $(findstring CYGWIN,$(OS))) + OS := WINNT +else +ifneq (, $(findstring Windows_NT,$(OS))) + OS := WINNT +endif +endif +endif +endif + +# Define the program used for compiling C source files: +ifdef C_COMPILER + CC := $(C_COMPILER) +else + CC := gcc +endif + +# Define the command-line options when compiling C files: +CFLAGS ?= \ + -std=c99 \ + -O3 \ + -Wall \ + -pedantic + +# Determine whether to generate position independent code ([1][1], [2][2]). +# +# [1]: https://gcc.gnu.org/onlinedocs/gcc/Code-Gen-Options.html#Code-Gen-Options +# [2]: http://stackoverflow.com/questions/5311515/gcc-fpic-option +ifeq ($(OS), WINNT) + fPIC ?= +else + fPIC ?= -fPIC +endif + +# List of includes (e.g., `-I /foo/bar -I /beep/boop/include`): +INCLUDE ?= + +# List of source files: +SOURCE_FILES ?= + +# List of libraries (e.g., `-lopenblas -lpthread`): +LIBRARIES ?= + +# List of library paths (e.g., `-L /foo/bar -L /beep/boop`): +LIBPATH ?= + +# List of C targets: +c_targets := example.out + + +# RULES # + +#/ +# Compiles source files. +# +# @param {string} [C_COMPILER] - C compiler (e.g., `gcc`) +# @param {string} [CFLAGS] - C compiler options +# @param {(string|void)} [fPIC] - compiler flag determining whether to generate position independent code (e.g., `-fPIC`) +# @param {string} [INCLUDE] - list of includes (e.g., `-I /foo/bar -I /beep/boop/include`) +# @param {string} [SOURCE_FILES] - list of source files +# @param {string} [LIBPATH] - list of library paths (e.g., `-L /foo/bar -L /beep/boop`) +# @param {string} [LIBRARIES] - list of libraries (e.g., `-lopenblas -lpthread`) +# +# @example +# make +# +# @example +# make all +#/ +all: $(c_targets) + +.PHONY: all + +#/ +# Compiles C source files. +# +# @private +# @param {string} CC - C compiler (e.g., `gcc`) +# @param {string} CFLAGS - C compiler options +# @param {(string|void)} fPIC - compiler flag determining whether to generate position independent code (e.g., `-fPIC`) +# @param {string} INCLUDE - list of includes (e.g., `-I /foo/bar`) +# @param {string} SOURCE_FILES - list of source files +# @param {string} LIBPATH - list of library paths (e.g., `-L /foo/bar`) +# @param {string} LIBRARIES - list of libraries (e.g., `-lopenblas`) +#/ +$(c_targets): %.out: %.c + $(QUIET) $(CC) $(CFLAGS) $(fPIC) $(INCLUDE) -o $@ $(SOURCE_FILES) $< $(LIBPATH) -lm $(LIBRARIES) + +#/ +# Runs compiled examples. +# +# @example +# make run +#/ +run: $(c_targets) + $(QUIET) ./$< + +.PHONY: run + +#/ +# Removes generated files. +# +# @example +# make clean +#/ +clean: + $(QUIET) -rm -f *.o *.out + +.PHONY: clean diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/examples/c/example.c b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/examples/c/example.c new file mode 100644 index 000000000000..26707392bcbe --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/examples/c/example.c @@ -0,0 +1,42 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2026 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +#include "stdlib/stats/base/dists/gamma/quantile.h" +#include +#include + +static double random_uniform( double min, double max ) { + double scale = rand() / (double) RAND_MAX; + return min + ( scale * ( max - min ) ); +} + +int main( void ) { + double alpha; + double beta; + double p; + double y; + int i; + + for ( i = 0; i < 25; i++ ) { + p = random_uniform( 0.0, 1.0 ); + alpha = random_uniform( 0.1, 5.0 ); + beta = random_uniform( 0.1, 5.0 ); + y = stdlib_base_dists_gamma_quantile( p, alpha, beta ); + printf( "p: %lf, α: %lf, β: %lf, Q(p;α,β): %lf\n", p, alpha, beta, y ); + } +} diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/include.gypi b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/include.gypi new file mode 100644 index 000000000000..bee8d41a2caf --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/include.gypi @@ -0,0 +1,53 @@ +# @license Apache-2.0 +# +# Copyright (c) 2026 The Stdlib Authors. +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + +# A GYP include file for building a Node.js native add-on. +# +# Main documentation: +# +# [1]: https://gyp.gsrc.io/docs/InputFormatReference.md +# [2]: https://gyp.gsrc.io/docs/UserDocumentation.md +{ + # Define variables to be used throughout the configuration for all targets: + 'variables': { + # Source directory: + 'src_dir': './src', + + # Include directories: + 'include_dirs': [ + ' + +/** +* Evaluates the quantile function for a gamma distribution with shape parameter `alpha` and rate parameter `beta` at a probability `p`. +* +* @param p input probability +* @param alpha shape parameter +* @param beta rate parameter +* @return evaluated quantile function +* +* @example +* double y = stdlib_base_dists_gamma_quantile( 0.8, 2.0, 1.0 ); +* // returns ~2.994 +*/ +double stdlib_base_dists_gamma_quantile( const double p, const double alpha, const double beta ) { + if ( + stdlib_base_is_nan( p ) || + stdlib_base_is_nan( alpha ) || + stdlib_base_is_nan( beta ) || + alpha < 0.0 || + beta <= 0.0 || + p < 0.0 || + p > 1.0 + ) { + return 0.0 / 0.0; // NaN + } + if ( alpha == 0.0 ) { + return 0.0; + } + return ( 1.0 / beta ) * stdlib_base_gammaincinv( p, alpha, false ); +} diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/test/test.native.js b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/test/test.native.js new file mode 100644 index 000000000000..d5a1b929764c --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/test/test.native.js @@ -0,0 +1,193 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2026 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +'use strict'; + +// MODULES // + +var resolve = require( 'path' ).resolve; +var tape = require( 'tape' ); +var isAlmostSameValue = require( '@stdlib/assert/is-almost-same-value' ); +var isnan = require( '@stdlib/math/base/assert/is-nan' ); +var PINF = require( '@stdlib/constants/float64/pinf' ); +var NINF = require( '@stdlib/constants/float64/ninf' ); +var tryRequire = require( '@stdlib/utils/try-require' ); + + +// VARIABLES // + +var quantile = tryRequire( resolve( __dirname, './../lib/native.js' ) ); +var opts = { + 'skip': ( quantile instanceof Error ) +}; + + +// FIXTURES // + +var largeRate = require( './fixtures/julia/large_rate.json' ); +var largeShape = require( './fixtures/julia/large_shape.json' ); +var bothLarge = require( './fixtures/julia/both_large.json' ); + + +// TESTS // + +tape( 'main export is a function', opts, function test( t ) { + t.ok( true, __filename ); + t.strictEqual( typeof quantile, 'function', 'main export is a function' ); + t.end(); +}); + +tape( 'if provided `NaN` for any parameter, the function returns `NaN`', opts, function test( t ) { + var y = quantile( NaN, 0.0, 1.0 ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + y = quantile( 0.0, NaN, 1.0 ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + y = quantile( 0.0, 1.0, NaN ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + t.end(); +}); + +tape( 'if provided a number outside `[0,1]` for `p` and a valid `alpha` and `beta`, the function returns `NaN`', opts, function test( t ) { + var y = quantile( 1.1, 1.0, 1.0 ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + y = quantile( -0.1, 1.0, 1.0 ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + t.end(); +}); + +tape( 'if provided a negative `alpha`, the function returns `NaN`', opts, function test( t ) { + var y; + + y = quantile( 2.0, -1.0, 2.0 ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + + y = quantile( 0.0, -1.0, 2.0 ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + + y = quantile( 2.0, NINF, 1.0 ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + + y = quantile( 2.0, NINF, PINF ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + + y = quantile( 2.0, NINF, NINF ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + + y = quantile( 2.0, NINF, NaN ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + + t.end(); +}); + +tape( 'if provided a nonpositive`beta`, the function returns `NaN`', opts, function test( t ) { + var y; + + y = quantile( 2.0, 2.0, 0.0 ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + + y = quantile( 2.0, 2.0, -1.0 ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + + y = quantile( 0.0, 2.0, -1.0 ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + + y = quantile( 2.0, 1.0, NINF ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + + y = quantile( 2.0, PINF, NINF ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + + y = quantile( 2.0, NINF, NINF ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + + y = quantile( 2.0, NaN, NINF ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + + t.end(); +}); + +tape( 'if provided `alpha` equal to `0.0`, the function returns `0.0` for a valid `p`', opts, function test( t ) { + var y = quantile( 0.2, 0.0, 2.0 ); + t.strictEqual( y, 0.0, 'returns expected value' ); + y = quantile( 0.9, 0.0, 2.0 ); + t.strictEqual( y, 0.0, 'returns expected value' ); + + y = quantile( 1.1, 0.0, 2.0 ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + y = quantile( -0.1, 0.0, 2.0 ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); + + t.end(); +}); + +tape( 'the function evaluates the quantile for `x` given large parameters `alpha` and `beta`', opts, function test( t ) { + var expected; + var alpha; + var beta; + var p; + var y; + var i; + + expected = bothLarge.expected; + p = bothLarge.p; + alpha = bothLarge.alpha; + beta = bothLarge.beta; + for ( i = 0; i < p.length; i++ ) { + y = quantile( p[i], alpha[i], beta[i] ); + t.strictEqual( isAlmostSameValue( y, expected[ i ], 25 ), true, 'returns expected value' ); + } + t.end(); +}); + +tape( 'the function evaluates the quantile for `x` given large shape parameter `alpha`', opts, function test( t ) { + var expected; + var alpha; + var beta; + var p; + var y; + var i; + + expected = largeShape.expected; + p = largeShape.p; + alpha = largeShape.alpha; + beta = largeShape.beta; + for ( i = 0; i < p.length; i++ ) { + y = quantile( p[i], alpha[i], beta[i] ); + t.strictEqual( isAlmostSameValue( y, expected[ i ], 19 ), true, 'returns expected value' ); + } + t.end(); +}); + +tape( 'the function evaluates the quantile for `x` given large rate parameter `beta`', opts, function test( t ) { + var expected; + var alpha; + var beta; + var p; + var y; + var i; + + expected = largeRate.expected; + p = largeRate.p; + alpha = largeRate.alpha; + beta = largeRate.beta; + for ( i = 0; i < p.length; i++ ) { + y = quantile( p[i], alpha[i], beta[i] ); + t.strictEqual( isAlmostSameValue( y, expected[ i ], 96 ), true, 'returns expected value' ); + } + t.end(); +}); From 7c1aba61bf3e960c7d89d103c543e039c9394c41 Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Sun, 4 Oct 2026 14:27:05 -0700 Subject: [PATCH 2/5] docs: update documentation and examples --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown_pkg_readmes status: passed - task: lint_markdown_docs status: na - task: lint_markdown status: na - task: lint_package_json status: na - task: lint_repl_help status: passed - task: lint_javascript_src status: passed - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: na - task: lint_javascript_benchmarks status: na - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: passed - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: passed - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- .../stats/base/dists/gamma/quantile/README.md | 31 +++++++++++++------ .../base/dists/gamma/quantile/docs/repl.txt | 2 +- .../dists/gamma/quantile/examples/c/example.c | 6 ++-- .../stdlib/stats/base/dists/gamma/quantile.h | 2 +- .../base/dists/gamma/quantile/lib/main.js | 2 +- .../base/dists/gamma/quantile/lib/native.js | 12 ++++++- 6 files changed, 39 insertions(+), 16 deletions(-) diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/README.md b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/README.md index abb513815569..2811e49969bc 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/README.md +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/README.md @@ -150,19 +150,25 @@ logEachMap( 'p: %0.4f, α: %0.4f, β: %0.4f, Q(p;α,β): %0.4f', p, alpha, beta, - + + +* * *
+## C APIs + + +
-
+ -## C APIs +
### Usage @@ -177,9 +183,6 @@ Evaluates the [quantile function][quantile-function] for a [gamma][gamma-distrib ```c double out = stdlib_base_dists_gamma_quantile( 0.8, 2.0, 1.0 ); // returns ~2.994 - -out = stdlib_base_dists_gamma_quantile( 0.5, 4.0, 2.0 ); -// returns ~1.836 ``` The function accepts the following arguments: @@ -196,6 +199,16 @@ double stdlib_base_dists_gamma_quantile( const double p, const double alpha, con + + +
+ +
+ + + + +
### Examples @@ -205,9 +218,9 @@ double stdlib_base_dists_gamma_quantile( const double p, const double alpha, con #include #include -static double random_uniform( double min, double max ) { - double scale = rand() / (double) RAND_MAX; - return min + ( scale * ( max - min ) ); +static double random_uniform( const double min, const double max ) { + double v = (double)rand() / ( (double)RAND_MAX + 1.0 ); + return min + ( v*(max-min) ); } int main( void ) { diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/docs/repl.txt b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/docs/repl.txt index 7527a87578d0..2dec544f261a 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/docs/repl.txt +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/docs/repl.txt @@ -44,7 +44,7 @@ > y = {{alias}}( 0.0, 1.0, NaN ) NaN - // Non-positive shape parameter: + // Negative shape parameter: > y = {{alias}}( 0.5, -1.0, 1.0 ) NaN // Non-positive rate parameter: diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/examples/c/example.c b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/examples/c/example.c index 26707392bcbe..57adad13405b 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/examples/c/example.c +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/examples/c/example.c @@ -20,9 +20,9 @@ #include #include -static double random_uniform( double min, double max ) { - double scale = rand() / (double) RAND_MAX; - return min + ( scale * ( max - min ) ); +static double random_uniform( const double min, const double max ) { + double v = (double)rand() / ( (double)RAND_MAX + 1.0 ); + return min + ( v*(max-min) ); } int main( void ) { diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/include/stdlib/stats/base/dists/gamma/quantile.h b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/include/stdlib/stats/base/dists/gamma/quantile.h index 956a328ed8c8..0a24759051ba 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/include/stdlib/stats/base/dists/gamma/quantile.h +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/include/stdlib/stats/base/dists/gamma/quantile.h @@ -27,7 +27,7 @@ extern "C" { #endif /** -* Evaluates the quantile function for a gamma distribution. +* Evaluates the quantile function for a gamma distribution with shape parameter `alpha` and rate parameter `beta` at a probability `p`. */ double stdlib_base_dists_gamma_quantile( const double p, const double alpha, const double beta ); diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/lib/main.js b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/lib/main.js index 73e1f48ddb8c..945ee50ddc0d 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/lib/main.js +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/lib/main.js @@ -63,7 +63,7 @@ var gammaincinv = require( '@stdlib/math/base/special/gammaincinv' ); * // returns NaN * * @example -* // Non-positive shape parameter: +* // Negative shape parameter: * var y = quantile( 0.5, -1.0, 1.0 ); * // returns NaN * diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/lib/native.js b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/lib/native.js index ec141a0ba757..cd855772d443 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/lib/native.js +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/lib/native.js @@ -26,7 +26,7 @@ var addon = require( './../src/addon.node' ); // MAIN // /** -* Evaluates the quantile function for a gamma distribution. +* Evaluates the quantile function for a gamma distribution with shape parameter `alpha` and rate parameter `beta` at a probability `p`. * * @private * @param {Probability} p - input value @@ -61,6 +61,16 @@ var addon = require( './../src/addon.node' ); * @example * var y = quantile( 0.0, 1.0, NaN ); * // returns NaN +* +* @example +* // Negative shape parameter: +* var y = quantile( 0.5, -1.0, 1.0 ); +* // returns NaN +* +* @example +* // Non-positive rate parameter: +* var y = quantile( 0.5, 1.0, -1.0 ); +* // returns NaN */ function quantile( p, alpha, beta ) { return addon( p, alpha, beta ); From c00ffb53d567cb410f38916fc7549436bc0cbc8d Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Sun, 4 Oct 2026 14:27:51 -0700 Subject: [PATCH 3/5] test: update tolerances and assertion messages The native implementation can differ from the JavaScript implementation by an additional ULP on some platforms due to compiler optimizations in dependency code. --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown_pkg_readmes status: na - task: lint_markdown_docs status: na - task: lint_markdown status: na - task: lint_package_json status: na - task: lint_repl_help status: na - task: lint_javascript_src status: na - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: passed - task: lint_javascript_benchmarks status: na - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: passed - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- .../stats/base/dists/gamma/quantile/test/test.factory.js | 8 ++++---- .../stats/base/dists/gamma/quantile/test/test.native.js | 4 ++-- 2 files changed, 6 insertions(+), 6 deletions(-) diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/test/test.factory.js b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/test/test.factory.js index 0a72dd1e0bc2..7d992f69e400 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/test/test.factory.js +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/test/test.factory.js @@ -167,16 +167,16 @@ tape( 'if `alpha` equals `0`, the created function evaluates a degenerate distri quantile = factory( 0.0, 2.0 ); y = quantile( 0.3 ); - t.strictEqual( y, 0.0, 'returns 0 for p inside [0,1]' ); + t.strictEqual( y, 0.0, 'returns expected value' ); y = quantile( 0.9 ); - t.strictEqual( y, 0.0, 'returns 0 for p inside [0,1]' ); + t.strictEqual( y, 0.0, 'returns expected value' ); y = quantile( 1.1 ); - t.strictEqual( isnan( y ), true, 'returns NaN for p outside [0,1]' ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); y = quantile( -0.1 ); - t.strictEqual( isnan( y ), true, 'returns NaN for p outside [0,1]' ); + t.strictEqual( isnan( y ), true, 'returns expected value' ); t.end(); }); diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/test/test.native.js b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/test/test.native.js index d5a1b929764c..73dc59a36c36 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/test/test.native.js +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/test/test.native.js @@ -24,9 +24,9 @@ var resolve = require( 'path' ).resolve; var tape = require( 'tape' ); var isAlmostSameValue = require( '@stdlib/assert/is-almost-same-value' ); var isnan = require( '@stdlib/math/base/assert/is-nan' ); +var tryRequire = require( '@stdlib/utils/try-require' ); var PINF = require( '@stdlib/constants/float64/pinf' ); var NINF = require( '@stdlib/constants/float64/ninf' ); -var tryRequire = require( '@stdlib/utils/try-require' ); // VARIABLES // @@ -149,7 +149,7 @@ tape( 'the function evaluates the quantile for `x` given large parameters `alpha beta = bothLarge.beta; for ( i = 0; i < p.length; i++ ) { y = quantile( p[i], alpha[i], beta[i] ); - t.strictEqual( isAlmostSameValue( y, expected[ i ], 25 ), true, 'returns expected value' ); + t.strictEqual( isAlmostSameValue( y, expected[ i ], 26 ), true, 'returns expected value' ); } t.end(); }); From 7cc21f1ca2c29b40bfd6661f3a24d0c3cf3d698d Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Sun, 4 Oct 2026 14:28:12 -0700 Subject: [PATCH 4/5] chore: code review --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown_pkg_readmes status: na - task: lint_markdown_docs status: na - task: lint_markdown status: na - task: lint_package_json status: na - task: lint_repl_help status: na - task: lint_javascript_src status: na - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: na - task: lint_javascript_benchmarks status: passed - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: passed - task: lint_c_examples status: na - task: lint_c_benchmarks status: passed - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: passed - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- .../gamma/quantile/benchmark/benchmark.native.js | 14 ++++++-------- .../dists/gamma/quantile/benchmark/c/benchmark.c | 4 ++-- .../stats/base/dists/gamma/quantile/src/addon.c | 2 +- .../stats/base/dists/gamma/quantile/src/main.c | 3 +-- 4 files changed, 10 insertions(+), 13 deletions(-) diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/benchmark.native.js b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/benchmark.native.js index 27dbc235cf79..0dc9cc2a9c7a 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/benchmark.native.js +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/benchmark.native.js @@ -43,19 +43,17 @@ var opts = { bench( format( '%s::native', pkg ), opts, function benchmark( b ) { var alpha; var beta; + var opts; var p; var y; var i; - p = uniform( 100, 0.0, 1.0, { + opts = { 'dtype': 'float64' - }); - alpha = uniform( 100, EPS, 100.0, { - 'dtype': 'float64' - }); - beta = uniform( 100, EPS, 100.0, { - 'dtype': 'float64' - }); + }; + p = uniform( 100, 0.0, 1.0, opts ); + alpha = uniform( 100, EPS, 100.0, opts ); + beta = uniform( 100, EPS, 100.0, opts ); b.tic(); for ( i = 0; i < b.iterations; i++ ) { diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/c/benchmark.c b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/c/benchmark.c index 8ee255cf1ab0..bc1326a0674a 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/c/benchmark.c +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/benchmark/c/benchmark.c @@ -92,18 +92,18 @@ static double random_uniform( const double min, const double max ) { * @return elapsed time in seconds */ static double benchmark( void ) { - double elapsed; double alpha[ 100 ]; double beta[ 100 ]; double p[ 100 ]; + double elapsed; double y; double t; int i; for ( i = 0; i < 100; i++ ) { + p[ i ] = random_uniform( 0.0, 1.0 ); alpha[ i ] = random_uniform( 0.1, 100.0 ); beta[ i ] = random_uniform( 0.1, 100.0 ); - p[ i ] = random_uniform( 0.0, 1.0 ); } t = tic(); diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/src/addon.c b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/src/addon.c index 72c63c8fe506..b114232e6d45 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/src/addon.c +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/src/addon.c @@ -16,7 +16,7 @@ * limitations under the License. */ -#include "stdlib/math/base/napi/ternary.h" #include "stdlib/stats/base/dists/gamma/quantile.h" +#include "stdlib/math/base/napi/ternary.h" STDLIB_MATH_BASE_NAPI_MODULE_DDD_D( stdlib_base_dists_gamma_quantile ) diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/src/main.c b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/src/main.c index 4b5cd2232fe9..3a0110ae6d00 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/src/main.c +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/src/main.c @@ -19,7 +19,6 @@ #include "stdlib/stats/base/dists/gamma/quantile.h" #include "stdlib/math/base/special/gammaincinv.h" #include "stdlib/math/base/assert/is_nan.h" -#include /** * Evaluates the quantile function for a gamma distribution with shape parameter `alpha` and rate parameter `beta` at a probability `p`. @@ -35,9 +34,9 @@ */ double stdlib_base_dists_gamma_quantile( const double p, const double alpha, const double beta ) { if ( - stdlib_base_is_nan( p ) || stdlib_base_is_nan( alpha ) || stdlib_base_is_nan( beta ) || + stdlib_base_is_nan( p ) || alpha < 0.0 || beta <= 0.0 || p < 0.0 || From 2a6c01b32fa4f4b56cdcf0540d0b05bf7c8b18f4 Mon Sep 17 00:00:00 2001 From: Karan Anand Date: Sun, 4 Oct 2026 14:28:55 -0700 Subject: [PATCH 5/5] chore: update keywords --- type: pre_commit_static_analysis_report description: Results of running static analysis checks when committing changes. report: - task: lint_filenames status: passed - task: lint_editorconfig status: passed - task: lint_markdown_pkg_readmes status: na - task: lint_markdown_docs status: na - task: lint_markdown status: na - task: lint_package_json status: passed - task: lint_repl_help status: na - task: lint_javascript_src status: na - task: lint_javascript_cli status: na - task: lint_javascript_examples status: na - task: lint_javascript_tests status: na - task: lint_javascript_benchmarks status: na - task: lint_python status: na - task: lint_r status: na - task: lint_c_src status: na - task: lint_c_examples status: na - task: lint_c_benchmarks status: na - task: lint_c_tests_fixtures status: na - task: lint_shell status: na - task: lint_typescript_declarations status: passed - task: lint_typescript_tests status: na - task: lint_license_headers status: passed --- --- .../@stdlib/stats/base/dists/gamma/quantile/package.json | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/package.json b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/package.json index eab265eb98ae..9f70249fa9b7 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/package.json +++ b/lib/node_modules/@stdlib/stats/base/dists/gamma/quantile/package.json @@ -59,8 +59,9 @@ "distribution", "dist", "probability", - "cdf", + "quantile", "inverse", + "cdf", "gamma", "univariate", "continuous"