Merge branch 'main' into fix-sparse-operator-simplify

Author: mhucka

dev_tools/requirements/Dockerfile

@@ -19,11 +19,14 @@ WORKDIR /pip-compile
 
 # Step 0: install pip-tools
 COPY envs/pip-tools.env.txt ./
-RUN pip install -r pip-tools.env.txt
+
+# hadolint global ignore=DL3013
+RUN pip install -U pip --no-cache-dir --root-user-action ignore && \
+    pip install -r pip-tools.env.txt --no-cache-dir --root-user-action ignore
 
 # Step 1: compile a complete & consistent environment with all dependencies
 COPY deps/ ./deps/
 COPY run-pip-compiles.py ./
 
 ARG PLATFORM="default"
-RUN python run-pip-compiles.py --platform $PLATFORM
+RUN python run-pip-compiles.py --platform $PLATFORM

dev_tools/requirements/deps/runtime.txt

@@ -1,4 +1,4 @@
-cirq-core>=1.4.1
+cirq-core>=1.4.1,<1.6.0
 deprecation
 h5py>=3.10.0
 networkx
@@ -9,3 +9,13 @@ requests~=2.32.2
 scipy~=1.15
 
 sympy
+
+# Transitive dependency. Versions 1.3.3+ require Python 311. Constraining it
+# lets us produce a single set of requirements files for Python 3.10 - 3.12.
+contourpy<1.3.3
+
+# Another transitive dependency. We don't care about the version of this
+# backport because it's only needed for a pytest extension. However, because we
+# run pip-compile in Python 3.10 for maximum compatibility, we need to add an
+# explicit constraint to keep this package out of the requirements files.
+backports-asyncio-runner ; python_full_version < '3.11'

dev_tools/requirements/envs/dev.env.txt

@@ -4,86 +4,94 @@
 #
 #    pip-compile --output-file=envs/dev.env.txt deps/format.txt deps/mypy.txt deps/pip-tools.txt deps/pylint.txt deps/pytest.txt deps/resource_estimates_runtime.txt deps/runtime.txt
 #
-ase==3.25.0
+ase==3.27.0
     # via -r deps/resource_estimates_runtime.txt
-astroid==3.3.10
+astroid==3.3.11
     # via pylint
-attrs==25.3.0
+attrs==25.4.0
     # via
     #   cirq-core
     #   jsonschema
     #   referencing
+backports-asyncio-runner==1.2.0 ; python_full_version < "3.11"
+    # via
+    #   -r deps/runtime.txt
+    #   pytest-asyncio
 black==26.3.1
     # via -r deps/format.txt
-build==1.2.2.post1
+build==1.4.0
     # via pip-tools
-certifi==2025.4.26
+certifi==2026.2.25
     # via requests
-charset-normalizer==3.4.2
+charset-normalizer==3.4.5
     # via requests
 cirq-core==1.5.0
     # via -r deps/runtime.txt
-click==8.2.1
+click==8.3.1
     # via
     #   black
     #   pip-tools
 contourpy==1.3.2
-    # via matplotlib
-coverage[toml]==7.8.2
+    # via
+    #   -r deps/runtime.txt
+    #   matplotlib
+coverage[toml]==7.13.4
     # via pytest-cov
 cycler==0.12.1
     # via matplotlib
 deprecation==2.1.0
     # via -r deps/runtime.txt
-dill==0.4.0
+dill==0.4.1
     # via pylint
 duet==0.2.9
     # via cirq-core
-exceptiongroup==1.3.0
+exceptiongroup==1.3.1
     # via pytest
-execnet==2.1.1
+execnet==2.1.2
     # via pytest-xdist
-fastjsonschema==2.21.1
+fastjsonschema==2.21.2
     # via nbformat
-fonttools==4.58.1
+fonttools==4.62.0
     # via matplotlib
-h5py==3.13.0
+h5py==3.16.0
     # via
     #   -r deps/runtime.txt
     #   pyscf
-idna==3.10
+idna==3.11
     # via requests
-iniconfig==2.1.0
+iniconfig==2.3.0
     # via pytest
-isort==6.0.1
+isort==6.1.0
     # via pylint
 jax==0.4.38
     # via -r deps/resource_estimates_runtime.txt
 jaxlib==0.4.38
     # via
     #   -r deps/resource_estimates_runtime.txt
     #   jax
-jsonschema==4.24.0
+jsonschema==4.26.0
     # via nbformat
-jsonschema-specifications==2025.4.1
+jsonschema-specifications==2025.9.1
     # via jsonschema
-jupyter-core==5.8.1
+jupyter-core==5.9.1
     # via nbformat
-kiwisolver==1.4.8
+kiwisolver==1.5.0
     # via matplotlib
-matplotlib==3.10.3
+librt==0.8.1
+    # via mypy
+matplotlib==3.10.8
     # via
     #   ase
     #   cirq-core
 mccabe==0.7.0
     # via pylint
-ml-dtypes==0.5.1
+ml-dtypes==0.5.4
     # via
     #   jax
     #   jaxlib
 mpmath==1.3.0
     # via sympy
-mypy==1.16.0
+mypy==1.19.1
     # via -r deps/mypy.txt
 mypy-extensions==1.1.0
     # via
@@ -113,71 +121,76 @@ numpy==2.2.6
     #   types-networkx
 opt-einsum==3.4.0
     # via jax
-packaging==25.0
+packaging==26.0
     # via
     #   black
     #   build
     #   deprecation
     #   matplotlib
     #   pytest
-pandas==2.2.3
+    #   wheel
+pandas==2.3.3
     # via cirq-core
-pandas-stubs==2.2.3.250527
+pandas-stubs==2.3.3.260113
     # via -r deps/mypy.txt
-pathspec==0.12.1
+pathspec==1.0.4
     # via
     #   black
     #   mypy
-pillow==11.2.1
+pillow==12.1.1
     # via matplotlib
-pip-tools==7.4.1
+pip-tools==7.5.3
     # via -r deps/pip-tools.txt
-platformdirs==4.3.8
+platformdirs==4.9.4
     # via
     #   black
     #   jupyter-core
     #   pylint
 pluggy==1.6.0
-    # via pytest
-pubchempy==1.0.4
+    # via
+    #   pytest
+    #   pytest-cov
+pubchempy==1.0.5
     # via -r deps/runtime.txt
-pygments==2.19.1
+pygments==2.19.2
     # via pytest
-pylint==3.3.7
+pylint==3.3.9
     # via -r deps/pylint.txt
-pyparsing==3.2.3
+pyparsing==3.3.2
     # via matplotlib
 pyproject-hooks==1.2.0
     # via
     #   build
     #   pip-tools
-pyscf==2.9.0
+pyscf==2.12.1
     # via -r deps/resource_estimates_runtime.txt
-pytest==8.4.0
+pytest==9.0.2
     # via
     #   -r deps/pytest.txt
     #   pytest-asyncio
     #   pytest-cov
     #   pytest-xdist
-pytest-asyncio==1.0.0
+pytest-asyncio==1.3.0
     # via -r deps/pytest.txt
-pytest-cov==6.1.1
+pytest-cov==7.0.0
     # via -r deps/pytest.txt
-pytest-xdist==3.7.0
+pytest-xdist==3.8.0
     # via -r deps/pytest.txt
 python-dateutil==2.9.0.post0
     # via
     #   matplotlib
     #   pandas
-pytz==2025.2
+pytokens==0.4.1
+    # via black
+pytz==2026.1.post1
     # via pandas
-referencing==0.36.2
+referencing==0.37.0
     # via
     #   jsonschema
     #   jsonschema-specifications
-requests==2.32.3
+requests==2.32.5
     # via -r deps/runtime.txt
-rpds-py==0.25.1
+rpds-py==0.30.0
     # via
     #   jsonschema
     #   referencing
@@ -197,7 +210,7 @@ sympy==1.14.0
     # via
     #   -r deps/runtime.txt
     #   cirq-core
-tomli==2.2.1
+tomli==2.4.0
     # via
     #   black
     #   build
@@ -206,37 +219,38 @@ tomli==2.2.1
     #   pip-tools
     #   pylint
     #   pytest
-tomlkit==0.13.2
+tomlkit==0.14.0
     # via pylint
-tqdm==4.67.1
+tqdm==4.67.3
     # via cirq-core
 traitlets==5.14.3
     # via
     #   jupyter-core
     #   nbformat
-types-networkx==3.5.0.20250531
+types-networkx==3.6.1.20260303
     # via -r deps/mypy.txt
-types-pytz==2025.2.0.20250516
+types-pytz==2026.1.1.20260304
     # via pandas-stubs
-types-requests==2.32.0.20250602
+types-requests==2.32.4.20260107
     # via -r deps/mypy.txt
-types-setuptools==80.9.0.20250529
+types-setuptools==82.0.0.20260210
     # via -r deps/mypy.txt
-typing-extensions==4.14.0
+typing-extensions==4.15.0
     # via
     #   astroid
     #   black
     #   cirq-core
     #   exceptiongroup
     #   mypy
+    #   pytest-asyncio
     #   referencing
-tzdata==2025.2
+tzdata==2025.3
     # via pandas
-urllib3==2.4.0
+urllib3==2.6.3
     # via
     #   requests
     #   types-requests
-wheel==0.45.1
+wheel==0.46.3
     # via pip-tools
 
 # The following packages are considered to be unsafe in a requirements file: