Restore exact-pin fresh-clone initialization #412

Job	Run time
test (ubuntu-latest)	26s
repository-contract	24s
test (macos-latest)	1m 6s
test-windows (0)	49s
component-plant-integration	22s
component-control-program-compiler	16s
component-extension-conformance	9s
test-windows (5)	56s
component-surface-parity	13s
component-kernel-mechanism	14s
test-windows (3)	1m 19s
test-windows (1)	59s
test-windows (4)	1m 23s
component-standard-flow	12s
test-windows (2)	1m 40s
	10m 28s

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