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tools: link more targets with libatomic #14665

Job	Run time
Build slim tarball	2m 0s
aarch64-linux: Cache V8 build	1h 7m 52s
x86_64-darwin: with shared libraries / build	3h 43m 34s
aarch64-darwin: with shared libraries / build	5h 10m 8s
x86_64-linux: with shared libraries and perfetto / build	3h 3m 2s
aarch64-linux: with shared openssl-4.0.3 / build	20m 28s
aarch64-linux: with shared openssl-fips-3.5.8 / build	26m 36s
aarch64-linux: with shared boringssl-0.20260929.0 / build	22m 10s
aarch64-linux: with shared openssl-3.6.5 / build	21m 6s
aarch64-linux: with shared openssl-3.5.8 / build	21m 58s
	14h 58m 54s