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Added helper classes for TNM and EOD staging
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Lines changed: 461 additions & 1 deletion

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‎build.gradle‎

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@@ -10,7 +10,7 @@ plugins {
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}
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group = 'com.imsweb'
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version = '3.9'
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version = '3.10-SNAPSHOT'
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description = 'Java client library for SEER*API'
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println "Starting build using ${Jvm.current()}"

‎src/main/java/com/imsweb/seerapi/client/staging/eod/EodSchemaLookup.java‎

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/*
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* Copyright (C) 2015 Information Management Services, Inc.
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*/
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package com.imsweb.seerapi.client.staging.eod;
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import java.util.Arrays;
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import java.util.Collections;
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import java.util.HashSet;
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import java.util.Set;
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import com.imsweb.seerapi.client.staging.SchemaLookup;
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import com.imsweb.seerapi.client.staging.eod.EodStagingData.EodInput;
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public class EodSchemaLookup extends SchemaLookup {
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private static final Set<String> _ALLOWED_KEYS = Collections.unmodifiableSet(new HashSet<>(Arrays.asList(
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EodStagingData.PRIMARY_SITE_KEY,
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EodStagingData.HISTOLOGY_KEY,
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EodInput.SEX.toString(),
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EodInput.DISCRIMINATOR_1.toString(),
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EodInput.DISCRIMINATOR_2.toString())));
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/**
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* Constructor
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* @param site primary site
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* @param histology histology
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*/
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public EodSchemaLookup(String site, String histology) {
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super(site, histology);
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}
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@Override
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public Set<String> getAllowedKeys() {
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return _ALLOWED_KEYS;
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}
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}

‎src/main/java/com/imsweb/seerapi/client/staging/eod/EodStagingData.java‎

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/*
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* Copyright (C) 2014 Information Management Services, Inc.
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*/
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package com.imsweb.seerapi.client.staging.eod;
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import com.imsweb.seerapi.client.staging.StagingData;
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public class EodStagingData extends StagingData {
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/**
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* Default constructor
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*/
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public EodStagingData() {
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super();
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}
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/**
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* Construct with site and histology
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* @param site primary site
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* @param hist histology
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*/
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public EodStagingData(String site, String hist) {
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super(site, hist);
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}
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/**
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* Construct with site, histology and discriminators
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* @param site primary site
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* @param hist histology
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* @param discriminator1 first discriminator
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*/
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public EodStagingData(String site, String hist, String discriminator1) {
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super(site, hist);
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setInput(EodInput.DISCRIMINATOR_1, discriminator1);
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}
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/**
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* Construct with site, histology and discriminators
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* @param site primary site
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* @param hist histology
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* @param discriminator1 first discriminator
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* @param discriminator2 second discriminator
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*/
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public EodStagingData(String site, String hist, String discriminator1, String discriminator2) {
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super(site, hist);
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setInput(EodInput.DISCRIMINATOR_1, discriminator1);
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setInput(EodInput.DISCRIMINATOR_2, discriminator2);
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}
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/**
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* Return the specified input value
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* @param key input key
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* @return input
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*/
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public String getInput(EodInput key) {
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return getInput(key.toString());
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}
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/**
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* Set the specified input value
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* @param key input key
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* @param value value
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*/
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public void setInput(EodInput key, String value) {
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setInput(key.toString(), value);
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}
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/**
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* Return the specified output value
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* @param key output key
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* @return output
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*/
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public String getOutput(EodOutput key) {
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return getOutput(key.toString());
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}
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// input key definitions
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public enum EodInput {
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PRIMARY_SITE("site"),
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HISTOLOGY("hist"),
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BEHAVIOR("behavior"),
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SEX("sex"),
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AGE_AT_DX("age_dx"),
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DISCRIMINATOR_1("discriminator_1"),
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DISCRIMINATOR_2("discriminator_2"),
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CLIN_T("clin_t"),
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CLIN_T_SUFFIX("clin_t_suffix"),
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CLIN_N("clin_n"),
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CLIN_N_SUFFIX("clin_n_suffix"),
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CLIN_M("clin_m"),
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CLIN_STAGE_GROUP_DIRECT("clin_stage_group_direct"),
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PATH_T("path_t"),
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PATH_T_SUFFIX("path_t_suffix"),
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PATH_N("path_n"),
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PATH_N_SUFFIX("path_n_suffix"),
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PATH_M("path_m"),
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PATH_STAGE_GROUP_DIRECT("path_stage_group_direct"),
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YPATH_T("ypath_t"),
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YPATH_T_SUFFIX("ypath_t_suffix"),
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YPATH_N("ypath_n"),
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YPATH_N_SUFFIX("ypath_n_suffix"),
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YPATH_M("ypath_m"),
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YPATH_STAGE_GROUP_DIRECT("ypath_stage_group_direct"),
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NODES_POS("nodes_pos"),
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NODES_EXAM("nodes_exam"),
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EOD_PRIMARY_TUMOR("eod_primary_tumor"),
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EOD_REGIONAL_NODES("eod_regional_nodes"),
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EOD_METS("eod_mets"),
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GRADE_CLIN("grade_clin"),
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GRADE_PATH("grade_path"),
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GRADE_POST_THERAPY("grade_post_therapy"),
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DX_YEAR("year_dx"),
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TUMOR_SIZE_CLIN("size_clin"),
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TUMOR_SIZE_PATH("size_path"),
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TUMOR_SIZE_SUMMARY("size_summary"),
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RADIATION_SURG_SEQ("radiation_surg_seq"),
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SYSTEMIC_SURG_SEQ("systemic_surg_seq"),
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SS_2018("ss2018");
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private String _name;
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EodInput(String name) {
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_name = name;
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}
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@Override
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public String toString() {
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return _name;
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}
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}
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// output key definitions
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public enum EodOutput {
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NAACCR_SCHEMA_ID("naaccr_schema_id"),
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AJCC_ID("ajcc_id"),
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DERIVED_VERSION("derived_version"),
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EOD_2018_T("eod_2018_t"),
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EOD_2018_N("eod_2018_n"),
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EOD_2018_M("eod_2018_m"),
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EOD_2018_STAGE_GROUP("eod_2018_stage_group"),
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SS_2018_DERIVED("ss2018_derived");
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private String _name;
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EodOutput(String name) {
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_name = name;
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}
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@Override
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public String toString() {
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return _name;
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}
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}
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/**
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* TnmStagingInputBuilder builder
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*/
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public static class EodStagingInputBuilder {
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private EodStagingData _data;
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public EodStagingInputBuilder() {
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_data = new EodStagingData();
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}
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public EodStagingInputBuilder withDisciminator1(String discriminator1) {
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_data.setInput(EodInput.DISCRIMINATOR_1, discriminator1);
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return this;
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}
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public EodStagingInputBuilder withDisciminator2(String discriminator2) {
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_data.setInput(EodInput.DISCRIMINATOR_2, discriminator2);
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return this;
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}
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public EodStagingInputBuilder withInput(EodInput key, String value) {
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_data.setInput(key, value);
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return this;
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}
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public EodStagingData build() {
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return _data;
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}
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}
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}

‎src/main/java/com/imsweb/seerapi/client/staging/tnm/TnmSchemaLookup.java‎

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/*
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* Copyright (C) 2015 Information Management Services, Inc.
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*/
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package com.imsweb.seerapi.client.staging.tnm;
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import java.util.Arrays;
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import java.util.Collections;
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import java.util.HashSet;
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import java.util.Set;
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import com.imsweb.seerapi.client.staging.SchemaLookup;
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public class TnmSchemaLookup extends SchemaLookup {
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private static final Set<String> _ALLOWED_KEYS = Collections.unmodifiableSet(new HashSet<>(Arrays.asList(TnmStagingData.PRIMARY_SITE_KEY,
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TnmStagingData.HISTOLOGY_KEY, TnmStagingData.SSF25_KEY, TnmStagingData.SEX_KEY)));
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/**
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* Constructor
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* @param site primary site
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* @param histology histology
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*/
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public TnmSchemaLookup(String site, String histology) {
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super(site, histology);
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}
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@Override
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public Set<String> getAllowedKeys() {
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return _ALLOWED_KEYS;
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}
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}

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