Update various dependencies, add exclusions

Commons logging was found in multiple (transitive) dependencies.

(cherry picked from commit 49c31b9)

Author: bencomp

pom.xml

@@ -69,12 +69,17 @@
         <dependency>
             <groupId>commons-codec</groupId>
             <artifactId>commons-codec</artifactId>
-            <version>1.15</version>
+            <version>1.17.1</version>
+        </dependency>
+        <dependency>
+            <groupId>commons-fileupload</groupId>
+            <artifactId>commons-fileupload</artifactId>
+            <version>1.5</version>
         </dependency>
         <dependency>
             <groupId>com.github.jsonld-java</groupId>
             <artifactId>jsonld-java</artifactId>
-            <version>0.13.4</version>
+            <version>0.13.6</version>
             <exclusions>
                 <exclusion>
                     <groupId>org.apache.httpcomponents</groupId>
@@ -94,7 +99,7 @@
         <dependency>
             <groupId>jaxen</groupId>
             <artifactId>jaxen</artifactId>
-            <version>1.2.0</version>
+            <version>2.0.0</version>
         </dependency>
         <dependency>
             <groupId>org.jdom</groupId>
@@ -104,12 +109,12 @@
         <dependency>
             <groupId>com.fasterxml.jackson.core</groupId>
             <artifactId>jackson-core</artifactId>
-            <version>2.13.0</version>
+            <version>2.18.2</version>
         </dependency>
         <dependency>
             <groupId>com.fasterxml.jackson.core</groupId>
             <artifactId>jackson-databind</artifactId>
-            <version>2.13.2.1</version>
+            <version>2.18.2</version>
         </dependency>
         <dependency>
             <groupId>org.openrdf.sesame</groupId>
@@ -124,7 +129,7 @@
         <dependency>
             <groupId>org.apache.httpcomponents</groupId>
             <artifactId>httpclient</artifactId>
-            <version>4.5.13</version>
+            <version>4.5.14</version>
             <exclusions>
                 <exclusion>
                     <groupId>commons-logging</groupId>
@@ -167,18 +172,54 @@
             <groupId>org.elasticsearch.client</groupId>
             <artifactId>elasticsearch-rest-high-level-client</artifactId>
             <version>7.13.4</version>
+            <exclusions>
+                <exclusion>
+                    <groupId>commons-logging</groupId>
+                    <artifactId>commons-logging</artifactId>
+                </exclusion>
+            </exclusions>
         </dependency>
         <dependency>
             <groupId>com.amazonaws</groupId>
             <artifactId>aws-java-sdk-core</artifactId>
-            <version>1.12.129</version>
+            <version>1.12.779</version>
+            <exclusions>
+                <exclusion>
+                    <groupId>commons-logging</groupId>
+                    <artifactId>commons-logging</artifactId>
+                </exclusion>
+            </exclusions>
+        </dependency>
+        <!-- testing -->
+        <dependency>
+            <groupId>org.mockito</groupId>
+            <artifactId>mockito-core</artifactId>
+            <version>5.14.2</version>
+            <scope>test</scope>
         </dependency>
         <dependency>
             <groupId>junit</groupId>
             <artifactId>junit</artifactId>
             <version>4.13.2</version>
             <scope>test</scope>
         </dependency>
+        <!-- Authentication -->
+        <dependency>
+            <groupId>com.github.scribejava</groupId>
+            <artifactId>scribejava-apis</artifactId>
+            <version>8.3.3</version>
+        </dependency>
+        <dependency>
+            <groupId>org.springframework.security</groupId>
+            <artifactId>spring-security-core</artifactId>
+            <version>6.4.1</version>
+            <exclusions>
+                <exclusion>
+                    <groupId>org.springframework</groupId>
+                    <artifactId>spring-jcl</artifactId>
+                </exclusion>
+            </exclusions>
+        </dependency>
     </dependencies>
     <build>
         <finalName>simpleAnnotationStore</finalName>