Include entire codebase in coverage report.

Author: guzman-raphael

datajoint/admin.py

@@ -8,9 +8,7 @@
 logger = logging.getLogger(__name__.split(".")[0])
 
 
-def set_password(
-    new_password=None, connection=None, update_config=None
-):  # pragma: no cover
+def set_password(new_password=None, connection=None, update_config=None):
     connection = conn() if connection is None else connection
     if new_password is None:
         new_password = getpass("New password: ")
@@ -28,7 +26,7 @@ def set_password(
         config.save_local(verbose=True)
 
 
-def kill(restriction=None, connection=None, order_by=None):  # pragma: no cover
+def kill(restriction=None, connection=None, order_by=None):
     """
     view and kill database connections.
 

datajoint/connection.py

@@ -120,9 +120,9 @@ def conn(
         host = host if host is not None else config["database.host"]
         user = user if user is not None else config["database.user"]
         password = password if password is not None else config["database.password"]
-        if user is None:  # pragma: no cover
+        if user is None:
             user = input("Please enter DataJoint username: ")
-        if password is None:  # pragma: no cover
+        if password is None:
             password = getpass(prompt="Please enter DataJoint password: ")
         init_fun = (
             init_fun if init_fun is not None else config["connection.init_function"]

datajoint/dependencies.py

@@ -127,7 +127,7 @@ def load(self, force=True):
                 self.add_edge(fk["referenced_table"], alias_node, **props)
                 self.add_edge(alias_node, fk["referencing_table"], **props)
 
-        if not nx.is_directed_acyclic_graph(self):  # pragma: no cover
+        if not nx.is_directed_acyclic_graph(self):
             raise DataJointError("DataJoint can only work with acyclic dependencies")
         self._loaded = True