alsieve for now the old version

Author: WardDeb

pyproject.toml

@@ -63,20 +63,20 @@ repository = "https://github.com/deeptools/deepTools"
 packages = ["deeptools"]
 
 [project.scripts]
-#alignmentSieve = "deeptools.alignmentSieve:main"
-#bamCompare = "deeptools.bamCompare:main"
-#bamCoverage = "deeptools.bamCoverage:main"
+alignmentSieve = "deeptools.alignmentSieve:main"
+#bamCompare_old = "deeptools.bamCompare:main"
+#bamCoverage_old = "deeptools.bamCoverage:main"
 bamPEFragmentSize = "deeptools.bamPEFragmentSize:main"
 bigwigAverage = "deeptools.bigwigAverage:main"
 bigwigCompare = "deeptools.bigwigCompare:main"
 computeGCBias = "deeptools.computeGCBias:main"
-#computeMatrix = "deeptools.computeMatrix:main"
+#computeMatrix_old = "deeptools.computeMatrix:main"
 computeMatrixOperations = "deeptools.computeMatrixOperations:main"
 correctGCBias = "deeptools.correctGCBias:main"
 deeptools = "deeptools.deeptools_list_tools:main"
 estimateReadFiltering = "deeptools.estimateReadFiltering:main"
 estimateScaleFactor = "deeptools.estimateScaleFactor:main"
-#multiBamSummary = "deeptools.multiBamSummary:main"
+#multiBamSummary_old = "deeptools.multiBamSummary:main"
 multiBigwigSummary = "deeptools.multiBigwigSummary:main"
 plotCorrelation = "deeptools.plotCorrelation:main"
 plotCoverage = "deeptools.plotCoverage:main"
@@ -88,5 +88,5 @@ plotProfile = "deeptools.plotProfile:main"
 bamCoverage = "deeptools.bamCoverage2:main"
 bamCompare = "deeptools.bamCompare2:main"
 computeMatrix = "deeptools.computeMatrix2:main"
-alignmentSieve = "deeptools.alignmentSieve2:main"
+#alignmentSieve = "deeptools.alignmentSieve2:main"
 multiBamSummary = "deeptools.multiBamSummary2:main"