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Revert "Update performance test results [skip ci]"
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performance.md

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# VFBquery Performance Test Results
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**Test Date:** 2026-04-13 18:51:13 UTC
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**Git Commit:** e6305c538e164f2573c4c204fd3457acbe4675d5
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**Branch:** 38/merge
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**Workflow Run:** [24360853454](https://github.com/VirtualFlyBrain/VFBquery/actions/runs/24360853454)
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**Test Date:** 2026-03-30 10:31:19 UTC
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**Git Commit:** 01b7f4af4c1f78b683a728124e9892e85732161e
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**Branch:** main
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**Workflow Run:** [23740149842](https://github.com/VirtualFlyBrain/VFBquery/actions/runs/23740149842)
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## Test Overview
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Traceback (most recent call last):
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File "/home/runner/work/VFBquery/VFBquery/src/test/test_query_performance.py", line 660, in test_13_dataset_template_queries
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self.assertLess(duration, self.THRESHOLD_MEDIUM, "AllAlignedImages exceeded threshold")
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AssertionError: 4.026433706283569 not less than 3.0 : AllAlignedImages exceeded threshold
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AssertionError: 7.013141632080078 not less than 3.0 : AllAlignedImages exceeded threshold
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----------------------------------------------------------------------
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Ran 15 tests in 125.594s
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Ran 15 tests in 110.035s
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FAILED (failures=1)
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VFBquery functions patched with caching support
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================================================================================
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TERM INFO QUERIES
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================================================================================
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get_term_info (mushroom body): 1.7197s
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get_term_info (individual): 1.3654s
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get_term_info (mushroom body): 2.6564s
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get_term_info (individual): 2.6602s
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================================================================================
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NEURON PART OVERLAP QUERIES
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================================================================================
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NeuronsPartHere: 1.6850s
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NeuronsPartHere: 3.1075s
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================================================================================
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SYNAPTIC TERMINAL QUERIES
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================================================================================
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NeuronsSynaptic: 1.5972s
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NeuronsPresynapticHere: 1.3124s
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NeuronsPostsynapticHere: 1.6315s
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NeuronNeuronConnectivity: 1.5685s
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NeuronsSynaptic: 2.9505s
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NeuronsPresynapticHere: 2.4136s
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NeuronsPostsynapticHere: 2.1935s
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NeuronNeuronConnectivity: 1.9000s
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================================================================================
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ANATOMICAL HIERARCHY QUERIES
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================================================================================
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ComponentsOf: 1.1740s
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PartsOf: 1.3339s
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SubclassesOf: 1.1715s
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ComponentsOf: 1.9292s
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PartsOf: 2.4126s
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SubclassesOf: 1.8715s
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================================================================================
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TRACT/NERVE AND LINEAGE QUERIES
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================================================================================
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NeuronClassesFasciculatingHere: 1.5285s
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TractsNervesInnervatingHere: 1.2776s
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LineageClonesIn: 1.1748s
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NeuronClassesFasciculatingHere: 1.8822s
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TractsNervesInnervatingHere: 1.8852s
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LineageClonesIn: 1.8848s
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================================================================================
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IMAGE AND DEVELOPMENTAL QUERIES
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================================================================================
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ImagesNeurons: 2.1157s
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ImagesThatDevelopFrom: 1.2952s
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epFrag: 1.1740s
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ImagesNeurons: 3.1867s
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ImagesThatDevelopFrom: 1.9679s
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epFrag: 1.8675s
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================================================================================
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INSTANCE QUERIES
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================================================================================
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ListAllAvailableImages: 1.2677s
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ListAllAvailableImages: 1.8908s
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================================================================================
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CONNECTIVITY QUERIES
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NeuronNeuronConnectivityQuery: 1.2726s
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NeuronRegionConnectivityQuery: 1.2568s
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NeuronNeuronConnectivityQuery: 1.8734s
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NeuronRegionConnectivityQuery: 1.9057s
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================================================================================
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SIMILARITY QUERIES (Neo4j NBLAST)
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SimilarMorphologyTo: 0.7672s
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SimilarMorphologyTo: 0.9818s
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================================================================================
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NEURON INPUT QUERIES (Neo4j)
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================================================================================
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NeuronInputsTo: 3.3149s
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NeuronInputsTo: 3.3833s
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================================================================================
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EXPRESSION PATTERN QUERIES (Neo4j)
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================================================================================
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ExpressionOverlapsHere: 0.9710s
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ExpressionOverlapsHere: 1.2898s
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└─ Found 3922 total expression patterns, returned 10
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================================================================================
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TRANSCRIPTOMICS QUERIES (Neo4j scRNAseq)
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================================================================================
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anatScRNAseqQuery: 0.5957s
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anatScRNAseqQuery: 0.9500s
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└─ Found 57 total clusters, returned 10
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clusterExpression: 69.3918s
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clusterExpression: 14.0053s
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└─ Found 4588 genes expressed, returned 10
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clusterExpression: Skipped (test data may not exist): 69.39180970191956 not less than 15.0 : clusterExpression exceeded threshold
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expressionCluster: 0.7136s ✅
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expressionCluster: 0.9872s ✅
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└─ Found 9 clusters expressing gene
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scRNAdatasetData: 0.6722s
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scRNAdatasetData: 1.1084s
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└─ Found 13 clusters in dataset, returned 10
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================================================================================
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NBLAST SIMILARITY QUERIES
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SimilarMorphologyTo: 0.9145s
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SimilarMorphologyTo: 7.5624s
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└─ Found 215 NBLAST matches, returned 10
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SimilarMorphologyToPartOf: 0.6419s
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SimilarMorphologyToPartOf: 0.8351s
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└─ Found 0 NBLASTexp matches
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SimilarMorphologyToPartOfexp: 0.4844s
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SimilarMorphologyToPartOfexp: 0.7110s
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└─ Found 0 reverse NBLASTexp matches
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SimilarMorphologyToNB: 0.5615s
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SimilarMorphologyToNB: 0.8188s
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└─ Found 15 NeuronBridge matches, returned 10
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SimilarMorphologyToNBexp: 0.5670s
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SimilarMorphologyToNBexp: 1.1694s
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└─ Found 15 NeuronBridge expression matches, returned 10
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✅ All NBLAST similarity queries completed
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================================================================================
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DATASET/TEMPLATE QUERIES
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PaintedDomains: 0.7613s
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PaintedDomains: 0.9323s
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└─ Found 46 painted domains, returned 10
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DatasetImages: 0.5175s
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DatasetImages: 0.9288s
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└─ Found 46 images in dataset, returned 10
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AllAlignedImages: 4.0264s
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AllAlignedImages: 7.0131s
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└─ Found 527179 aligned images, returned 10
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PUBLICATION/TRANSGENE QUERIES
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TermsForPub: 0.7443s
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TermsForPub: 0.9332s
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└─ Found 2 terms for publication
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TransgeneExpressionHere: 1.3615s
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TransgeneExpressionHere: 2.7297s
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└─ Found 2340 transgene expressions, returned 10
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✅ All publication/transgene queries completed
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Performance test for specific term info queries. ... ok
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----------------------------------------------------------------------
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Ran 1 test in 2.705s
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Ran 1 test in 3.804s
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OK
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VFBquery functions patched with caching support
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==================================================
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Performance Test Results:
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==================================================
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FBbt_00003748 query took: 1.4327 seconds
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VFB_00101567 query took: 1.2721 seconds
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Total time for both queries: 2.7048 seconds
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Performance Level: 🟡 Good (1.5-3 seconds)
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FBbt_00003748 query took: 1.8841 seconds
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VFB_00101567 query took: 1.9189 seconds
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Total time for both queries: 3.8030 seconds
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Performance Level: 🟠 Acceptable (3-6 seconds)
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==================================================
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Performance test completed successfully!
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```
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- [GitHub Actions History](https://github.com/VirtualFlyBrain/VFBquery/actions/workflows/performance-test.yml)
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*Last updated: 2026-04-13 18:51:13 UTC*
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*Last updated: 2026-03-30 10:31:19 UTC*

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