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performance.md

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# VFBquery Performance Test Results
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**Test Date:** 2026-03-19 07:59:01 UTC
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**Git Commit:** 1b1173957542e5cba3872ad14714607a85d86cf4
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**Test Date:** 2026-03-19 08:16:02 UTC
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**Git Commit:** 5d4a465284cf9786c19a78f99f57850e6fef0887
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**Branch:** main
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**Workflow Run:** [23285248470](https://github.com/VirtualFlyBrain/VFBquery/actions/runs/23285248470)
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**Workflow Run:** [23285802149](https://github.com/VirtualFlyBrain/VFBquery/actions/runs/23285802149)
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## Test Overview
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Test publication and transgene queries ... ok
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----------------------------------------------------------------------
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Ran 15 tests in 71.889s
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Ran 15 tests in 69.990s
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OK
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VFBquery functions patched with caching support
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================================================================================
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TERM INFO QUERIES
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================================================================================
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get_term_info (mushroom body): 2.1233s
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get_term_info (individual): 1.8632s
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get_term_info (mushroom body): 2.1905s
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get_term_info (individual): 2.3133s
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================================================================================
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NEURON PART OVERLAP QUERIES
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================================================================================
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NeuronsPartHere: 2.2647s
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NeuronsPartHere: 2.2050s
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================================================================================
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SYNAPTIC TERMINAL QUERIES
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================================================================================
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NeuronsSynaptic: 2.0093s
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NeuronsPresynapticHere: 2.0098s
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NeuronsPostsynapticHere: 2.2233s
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NeuronNeuronConnectivity: 1.6691s
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NeuronsSynaptic: 2.2515s
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NeuronsPresynapticHere: 2.0003s
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NeuronsPostsynapticHere: 2.1191s
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NeuronNeuronConnectivity: 1.6858s
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================================================================================
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ANATOMICAL HIERARCHY QUERIES
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================================================================================
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ComponentsOf: 1.7338s
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PartsOf: 1.7003s
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SubclassesOf: 1.7001s
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ComponentsOf: 1.7417s
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PartsOf: 1.7147s
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SubclassesOf: 1.5689s
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================================================================================
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TRACT/NERVE AND LINEAGE QUERIES
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================================================================================
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NeuronClassesFasciculatingHere: 1.5466s
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TractsNervesInnervatingHere: 1.6908s
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LineageClonesIn: 1.5699s
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NeuronClassesFasciculatingHere: 1.5973s
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TractsNervesInnervatingHere: 1.6288s
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LineageClonesIn: 1.6018s
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================================================================================
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IMAGE AND DEVELOPMENTAL QUERIES
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ImagesNeurons: 2.8356s
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ImagesThatDevelopFrom: 1.5971s
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epFrag: 1.5973s
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ImagesNeurons: 2.7622s
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ImagesThatDevelopFrom: 1.8575s
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epFrag: 1.5653s
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================================================================================
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INSTANCE QUERIES
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================================================================================
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ListAllAvailableImages: 1.5439s
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ListAllAvailableImages: 1.6255s
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================================================================================
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CONNECTIVITY QUERIES
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NeuronNeuronConnectivityQuery: 1.5743s
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NeuronRegionConnectivityQuery: 1.7315s
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NeuronNeuronConnectivityQuery: 1.6143s
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NeuronRegionConnectivityQuery: 1.5827s
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================================================================================
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SIMILARITY QUERIES (Neo4j NBLAST)
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SimilarMorphologyTo: 0.9484s
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SimilarMorphologyTo: 0.8559s
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NEURON INPUT QUERIES (Neo4j)
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NeuronInputsTo: 3.1598s
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NeuronInputsTo: 3.0088s
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================================================================================
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EXPRESSION PATTERN QUERIES (Neo4j)
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ExpressionOverlapsHere: 1.1453s
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ExpressionOverlapsHere: 1.1350s
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└─ Found 3922 total expression patterns, returned 10
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================================================================================
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TRANSCRIPTOMICS QUERIES (Neo4j scRNAseq)
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================================================================================
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anatScRNAseqQuery: 0.8148s
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anatScRNAseqQuery: 0.7903s
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└─ Found 57 total clusters, returned 10
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clusterExpression: 2.2738s
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clusterExpression: 1.2640s
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└─ Found 4588 genes expressed, returned 10
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expressionCluster: 0.6665s
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expressionCluster: 0.7571s
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└─ Found 9 clusters expressing gene
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scRNAdatasetData: 0.8905s
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scRNAdatasetData: 0.7853s
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└─ Found 13 clusters in dataset, returned 10
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================================================================================
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NBLAST SIMILARITY QUERIES
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SimilarMorphologyTo: 1.2082s
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SimilarMorphologyTo: 1.0286s
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└─ Found 215 NBLAST matches, returned 10
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SimilarMorphologyToPartOf: 0.8636s
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SimilarMorphologyToPartOf: 0.6499s
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└─ Found 0 NBLASTexp matches
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SimilarMorphologyToPartOfexp: 0.7689s
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SimilarMorphologyToPartOfexp: 0.7583s
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└─ Found 0 reverse NBLASTexp matches
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SimilarMorphologyToNB: 0.7530s
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SimilarMorphologyToNB: 0.6596s
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└─ Found 15 NeuronBridge matches, returned 10
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SimilarMorphologyToNBexp: 0.8629s
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SimilarMorphologyToNBexp: 0.6392s
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└─ Found 15 NeuronBridge expression matches, returned 10
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✅ All NBLAST similarity queries completed
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DATASET/TEMPLATE QUERIES
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PaintedDomains: 0.7932s
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PaintedDomains: 0.8018s
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└─ Found 46 painted domains, returned 10
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DatasetImages: 0.7917s
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DatasetImages: 0.9047s
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└─ Found 46 images in dataset, returned 10
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AllAlignedImages: 2.4561s
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AllAlignedImages: 2.3948s
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└─ Found 465165 aligned images, returned 10
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AlignedDatasets: 0.7619s
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AlignedDatasets: 0.7824s
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└─ Found 72 aligned datasets, returned 10
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AllDatasets: 1.0502s
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AllDatasets: 0.9788s
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└─ Found 130 total datasets, returned 20
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✅ All dataset/template queries completed
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================================================================================
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PUBLICATION/TRANSGENE QUERIES
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TermsForPub: 0.7685s
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TermsForPub: 0.7935s
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└─ Found 2 terms for publication
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TransgeneExpressionHere: 1.5679s
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TransgeneExpressionHere: 1.5525s
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└─ Found 2338 transgene expressions, returned 10
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✅ All publication/transgene queries completed
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Performance test for specific term info queries. ... ok
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----------------------------------------------------------------------
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Ran 1 test in 3.212s
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Ran 1 test in 2.801s
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OK
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VFBquery functions patched with caching support
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==================================================
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Performance Test Results:
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==================================================
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FBbt_00003748 query took: 1.5897 seconds
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VFB_00101567 query took: 1.6223 seconds
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Total time for both queries: 3.2120 seconds
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Performance Level: 🟠 Acceptable (3-6 seconds)
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FBbt_00003748 query took: 1.2104 seconds
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VFB_00101567 query took: 1.5902 seconds
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Total time for both queries: 2.8006 seconds
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Performance Level: 🟡 Good (1.5-3 seconds)
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==================================================
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Performance test completed successfully!
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```
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- [GitHub Actions History](https://github.com/VirtualFlyBrain/VFBquery/actions/workflows/performance-test.yml)
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*Last updated: 2026-03-19 07:59:01 UTC*
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*Last updated: 2026-03-19 08:16:02 UTC*

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