Update performance test results [skip ci]

Author: actions-user

performance.md

@@ -1,9 +1,9 @@
 # VFBquery Performance Test Results
 
-**Test Date:** 2026-03-18 09:17:28 UTC
-**Git Commit:** 607378b14b2f8e988894859b38f28faa1bcbf1e3
+**Test Date:** 2026-03-19 04:16:46 UTC
+**Git Commit:** 650aa132102c8df768b99b269619fd4f71e6b06a
 **Branch:** main
-**Workflow Run:** [23237416852](https://github.com/VirtualFlyBrain/VFBquery/actions/runs/23237416852)
+**Workflow Run:** [23279511606](https://github.com/VirtualFlyBrain/VFBquery/actions/runs/23279511606)
 
 ## Test Overview
 
@@ -122,10 +122,10 @@ Test dataset and template queries
 Traceback (most recent call last):
   File "/home/runner/work/VFBquery/VFBquery/src/test/test_query_performance.py", line 660, in test_13_dataset_template_queries
     self.assertLess(duration, self.THRESHOLD_MEDIUM, "AllAlignedImages exceeded threshold")
-AssertionError: 3.176645040512085 not less than 3.0 : AllAlignedImages exceeded threshold
+AssertionError: 6.632084131240845 not less than 3.0 : AllAlignedImages exceeded threshold
 
 ----------------------------------------------------------------------
-Ran 15 tests in 90.293s
+Ran 15 tests in 116.683s
 
 FAILED (failures=1)
 VFBquery functions patched with caching support
@@ -137,113 +137,114 @@ VFBquery: SOLR caching enabled by default (3-month TTL)
 ================================================================================
 TERM INFO QUERIES
 ================================================================================
-get_term_info (mushroom body): 3.0792s ✅
-get_term_info (individual): 2.3052s ✅
+get_term_info (mushroom body): 2.1962s ✅
+get_term_info (individual): 1.6673s ✅
 
 ================================================================================
 NEURON PART OVERLAP QUERIES
 ================================================================================
-NeuronsPartHere: 2.6969s ✅
+NeuronsPartHere: 2.0149s ✅
 
 ================================================================================
 SYNAPTIC TERMINAL QUERIES
 ================================================================================
-NeuronsSynaptic: 3.2247s ✅
-NeuronsPresynapticHere: 2.0199s ✅
-NeuronsPostsynapticHere: 2.4104s ✅
-NeuronNeuronConnectivity: 1.8889s ✅
+NeuronsSynaptic: 1.8236s ✅
+NeuronsPresynapticHere: 1.7131s ✅
+NeuronsPostsynapticHere: 1.6719s ✅
+NeuronNeuronConnectivity: 1.4744s ✅
 
 ================================================================================
 ANATOMICAL HIERARCHY QUERIES
 ================================================================================
-ComponentsOf: 2.2586s ✅
-PartsOf: 1.8594s ✅
-SubclassesOf: 1.8684s ✅
+ComponentsOf: 1.5045s ✅
+PartsOf: 1.2768s ✅
+SubclassesOf: 1.2766s ✅
 
 ================================================================================
 TRACT/NERVE AND LINEAGE QUERIES
 ================================================================================
-NeuronClassesFasciculatingHere: 1.8251s ✅
-TractsNervesInnervatingHere: 1.8877s ✅
-LineageClonesIn: 1.8615s ✅
+NeuronClassesFasciculatingHere: 1.2788s ✅
+TractsNervesInnervatingHere: 1.7202s ✅
+LineageClonesIn: 1.1874s ✅
 
 ================================================================================
 IMAGE AND DEVELOPMENTAL QUERIES
 ================================================================================
-ImagesNeurons: 3.1220s ✅
-ImagesThatDevelopFrom: 1.9525s ✅
-epFrag: 1.8564s ✅
+ImagesNeurons: 2.2620s ✅
+ImagesThatDevelopFrom: 1.2323s ✅
+epFrag: 1.3792s ✅
 
 ================================================================================
 INSTANCE QUERIES
 ================================================================================
-ListAllAvailableImages: 1.8418s ✅
+ListAllAvailableImages: 1.2522s ✅
 
 ================================================================================
 CONNECTIVITY QUERIES
 ================================================================================
-NeuronNeuronConnectivityQuery: 1.8817s ✅
-NeuronRegionConnectivityQuery: 1.8563s ✅
+NeuronNeuronConnectivityQuery: 1.2273s ✅
+NeuronRegionConnectivityQuery: 1.3922s ✅
 
 ================================================================================
 SIMILARITY QUERIES (Neo4j NBLAST)
 ================================================================================
-SimilarMorphologyTo: 1.0805s ✅
+SimilarMorphologyTo: 0.6392s ✅
 
 ================================================================================
 NEURON INPUT QUERIES (Neo4j)
 ================================================================================
-NeuronInputsTo: 4.5897s ✅
+NeuronInputsTo: 2.8321s ✅
 
 ================================================================================
 EXPRESSION PATTERN QUERIES (Neo4j)
 ================================================================================
-ExpressionOverlapsHere: 1.4319s ✅
+ExpressionOverlapsHere: 0.9735s ✅
   └─ Found 3922 total expression patterns, returned 10
 
 ================================================================================
 TRANSCRIPTOMICS QUERIES (Neo4j scRNAseq)
 ================================================================================
-anatScRNAseqQuery: 0.9489s ✅
+anatScRNAseqQuery: 0.6256s ✅
   └─ Found 57 total clusters, returned 10
-clusterExpression: 0.9278s ✅
+clusterExpression: 34.7036s ✅
   └─ Found 4588 genes expressed, returned 10
-expressionCluster: 0.8521s ✅
+clusterExpression: Skipped (test data may not exist): 34.70363998413086 not less than 15.0 : clusterExpression exceeded threshold
+expressionCluster: 13.6422s ✅
   └─ Found 9 clusters expressing gene
-scRNAdatasetData: 9.4247s ✅
+scRNAdatasetData: 1.6521s ✅
   └─ Found 13 clusters in dataset, returned 10
 
 ================================================================================
 NBLAST SIMILARITY QUERIES
 ================================================================================
-SimilarMorphologyTo: 1.1357s ✅
+SimilarMorphologyTo: 0.7655s ✅
   └─ Found 215 NBLAST matches, returned 10
-SimilarMorphologyToPartOf: 0.6948s ✅
+SimilarMorphologyToPartOf: 1.0643s ✅
   └─ Found 0 NBLASTexp matches
-SimilarMorphologyToPartOfexp: 0.7001s ✅
+SimilarMorphologyToPartOfexp: 0.4727s ✅
   └─ Found 0 reverse NBLASTexp matches
-SimilarMorphologyToNB: 0.6979s ✅
+SimilarMorphologyToNB: 1.5214s ✅
   └─ Found 15 NeuronBridge matches, returned 10
-SimilarMorphologyToNBexp: 0.7092s ✅
+SimilarMorphologyToNBexp: 0.5670s ✅
   └─ Found 15 NeuronBridge expression matches, returned 10
 ✅ All NBLAST similarity queries completed
 
 ================================================================================
 DATASET/TEMPLATE QUERIES
 ================================================================================
-PaintedDomains: 0.9077s ✅
+PaintedDomains: 0.5969s ✅
   └─ Found 46 painted domains, returned 10
-DatasetImages: 0.7009s ✅
+DatasetImages: 0.6723s ✅
   └─ Found 46 images in dataset, returned 10
-AllAlignedImages: 3.1766s ✅
+AllAlignedImages: 6.6321s ✅
   └─ Found 465165 aligned images, returned 10
 
 ================================================================================
 PUBLICATION/TRANSGENE QUERIES
 ================================================================================
-TermsForPub: 0.9428s ✅
+TermsForPub: 0.6008s ✅
   └─ Found 2 terms for publication
-TransgeneExpressionHere: 2.1893s ✅
+TransgeneExpressionHere: 3.7719s ✅
   └─ Found 2338 transgene expressions, returned 10
 ✅ All publication/transgene queries completed
 
@@ -256,7 +257,7 @@ test_term_info_performance (src.test.term_info_queries_test.TermInfoQueriesTest)
 Performance test for specific term info queries. ... ok
 
 ----------------------------------------------------------------------
-Ran 1 test in 3.734s
+Ran 1 test in 2.520s
 
 OK
 VFBquery functions patched with caching support
@@ -266,10 +267,10 @@ VFBquery: SOLR caching enabled by default (3-month TTL)
 ==================================================
 Performance Test Results:
 ==================================================
-FBbt_00003748 query took: 1.8460 seconds
-VFB_00101567 query took: 1.8878 seconds
-Total time for both queries: 3.7339 seconds
-Performance Level: 🟠 Acceptable (3-6 seconds)
+FBbt_00003748 query took: 1.3052 seconds
+VFB_00101567 query took: 1.2148 seconds
+Total time for both queries: 2.5200 seconds
+Performance Level: 🟡 Good (1.5-3 seconds)
 ==================================================
 Performance test completed successfully!
 ```
@@ -287,4 +288,4 @@ Track performance trends across commits:
 - [GitHub Actions History](https://github.com/VirtualFlyBrain/VFBquery/actions/workflows/performance-test.yml)
 
 ---
-*Last updated: 2026-03-18 09:17:28 UTC*
+*Last updated: 2026-03-19 04:16:46 UTC*