Skip to content

Commit 54f9e43

Browse files
author
goksel
committed
Changed feature to refesTo for ComponentReference entities, added the new SO gorward
1 parent 7b79ab9 commit 54f9e43

49 files changed

Lines changed: 555 additions & 539 deletions

Some content is hidden

Large Commits have some content hidden by default. Use the searchbox below for content that may be hidden.

‎SBOL3/BBa_F2620_PoPSReceiver/BBa_F2620_PoPSReceiver.jsonld‎

Lines changed: 14 additions & 14 deletions
Original file line numberDiff line numberDiff line change
@@ -54,29 +54,29 @@
5454
"displayId" : "SubComponent1",
5555
"hasLocation" : "https://synbiohub.org/public/igem/BBa_B0015/SubComponent1/Range1",
5656
"instanceOf" : "https://synbiohub.org/public/igem/BBa_B0010",
57-
"orientation" : "sbol:inline"
57+
"orientation" : "SO:0001030"
5858
}, {
5959
"@id" : "https://synbiohub.org/public/igem/BBa_B0015/SubComponent1/Range1",
6060
"@type" : "sbol:Range",
6161
"displayId" : "Range1",
6262
"end" : "79",
6363
"hasSequence" : "https://synbiohub.org/public/igem/BBa_B0015_Sequence1",
64-
"orientation" : "sbol:inline",
64+
"orientation" : "SO:0001030",
6565
"start" : "1"
6666
}, {
6767
"@id" : "https://synbiohub.org/public/igem/BBa_B0015/SubComponent2",
6868
"@type" : "sbol:SubComponent",
6969
"displayId" : "SubComponent2",
7070
"hasLocation" : "https://synbiohub.org/public/igem/BBa_B0015/SubComponent2/Range1",
7171
"instanceOf" : "https://synbiohub.org/public/igem/BBa_B0012",
72-
"orientation" : "sbol:inline"
72+
"orientation" : "SO:0001030"
7373
}, {
7474
"@id" : "https://synbiohub.org/public/igem/BBa_B0015/SubComponent2/Range1",
7575
"@type" : "sbol:Range",
7676
"displayId" : "Range1",
7777
"end" : "121",
7878
"hasSequence" : "https://synbiohub.org/public/igem/BBa_B0015_Sequence1",
79-
"orientation" : "sbol:inline",
79+
"orientation" : "SO:0001030",
8080
"start" : "81"
8181
}, {
8282
"@id" : "https://synbiohub.org/public/igem/BBa_B0015_Sequence1",
@@ -226,74 +226,74 @@
226226
"displayId" : "SubComponent3",
227227
"hasLocation" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent3/Range1",
228228
"instanceOf" : "https://synbiohub.org/public/igem/BBa_R0040",
229-
"orientation" : "sbol:inline"
229+
"orientation" : "SO:0001030"
230230
}, {
231231
"@id" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent3/Range1",
232232
"@type" : "sbol:Range",
233233
"displayId" : "Range1",
234234
"end" : "53",
235235
"hasSequence" : "https://synbiohub.org/public/igem/BBa_F2620_Sequence1",
236-
"orientation" : "sbol:inline",
236+
"orientation" : "SO:0001030",
237237
"start" : "1"
238238
}, {
239239
"@id" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent4",
240240
"@type" : "sbol:SubComponent",
241241
"displayId" : "SubComponent4",
242242
"hasLocation" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent4/Range1",
243243
"instanceOf" : "https://synbiohub.org/public/igem/BBa_B0034",
244-
"orientation" : "sbol:inline"
244+
"orientation" : "SO:0001030"
245245
}, {
246246
"@id" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent4/Range1",
247247
"@type" : "sbol:Range",
248248
"displayId" : "Range1",
249249
"end" : "66",
250250
"hasSequence" : "https://synbiohub.org/public/igem/BBa_F2620_Sequence1",
251-
"orientation" : "sbol:inline",
251+
"orientation" : "SO:0001030",
252252
"start" : "55"
253253
}, {
254254
"@id" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent5",
255255
"@type" : "sbol:SubComponent",
256256
"displayId" : "SubComponent5",
257257
"hasLocation" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent5/Range1",
258258
"instanceOf" : "https://synbiohub.org/public/igem/BBa_C0062",
259-
"orientation" : "sbol:inline"
259+
"orientation" : "SO:0001030"
260260
}, {
261261
"@id" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent5/Range1",
262262
"@type" : "sbol:Range",
263263
"displayId" : "Range1",
264264
"end" : "847",
265265
"hasSequence" : "https://synbiohub.org/public/igem/BBa_F2620_Sequence1",
266-
"orientation" : "sbol:inline",
266+
"orientation" : "SO:0001030",
267267
"start" : "67"
268268
}, {
269269
"@id" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent6",
270270
"@type" : "sbol:SubComponent",
271271
"displayId" : "SubComponent6",
272272
"hasLocation" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent6/Range1",
273273
"instanceOf" : "https://synbiohub.org/public/igem/BBa_B0015",
274-
"orientation" : "sbol:inline"
274+
"orientation" : "SO:0001030"
275275
}, {
276276
"@id" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent6/Range1",
277277
"@type" : "sbol:Range",
278278
"displayId" : "Range1",
279279
"end" : "968",
280280
"hasSequence" : "https://synbiohub.org/public/igem/BBa_F2620_Sequence1",
281-
"orientation" : "sbol:inline",
281+
"orientation" : "SO:0001030",
282282
"start" : "848"
283283
}, {
284284
"@id" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent7",
285285
"@type" : "sbol:SubComponent",
286286
"displayId" : "SubComponent7",
287287
"hasLocation" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent7/Range1",
288288
"instanceOf" : "https://synbiohub.org/public/igem/BBa_R0062",
289-
"orientation" : "sbol:inline"
289+
"orientation" : "SO:0001030"
290290
}, {
291291
"@id" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent7/Range1",
292292
"@type" : "sbol:Range",
293293
"displayId" : "Range1",
294294
"end" : "1023",
295295
"hasSequence" : "https://synbiohub.org/public/igem/BBa_F2620_Sequence1",
296-
"orientation" : "sbol:inline",
296+
"orientation" : "SO:0001030",
297297
"start" : "969"
298298
}, {
299299
"@id" : "https://synbiohub.org/public/igem/BBa_F2620_Sequence1",

‎SBOL3/BBa_F2620_PoPSReceiver/BBa_F2620_PoPSReceiver.jsonld_expanded‎

Lines changed: 14 additions & 14 deletions
Original file line numberDiff line numberDiff line change
@@ -120,7 +120,7 @@
120120
}, {
121121
"@id" : "https://synbiohub.org/public/igem/BBa_B0015/SubComponent1",
122122
"http://sbols.org/v3#orientation" : [ {
123-
"@id" : "http://sbols.org/v3#inline"
123+
"@id" : "https://identifiers.org/SO:0001030"
124124
} ],
125125
"http://sbols.org/v3#instanceOf" : [ {
126126
"@id" : "https://synbiohub.org/public/igem/BBa_B0010"
@@ -138,7 +138,7 @@
138138
"@value" : "1"
139139
} ],
140140
"http://sbols.org/v3#orientation" : [ {
141-
"@id" : "http://sbols.org/v3#inline"
141+
"@id" : "https://identifiers.org/SO:0001030"
142142
} ],
143143
"http://sbols.org/v3#hasSequence" : [ {
144144
"@id" : "https://synbiohub.org/public/igem/BBa_B0015_Sequence1"
@@ -153,7 +153,7 @@
153153
}, {
154154
"@id" : "https://synbiohub.org/public/igem/BBa_B0015/SubComponent2",
155155
"http://sbols.org/v3#orientation" : [ {
156-
"@id" : "http://sbols.org/v3#inline"
156+
"@id" : "https://identifiers.org/SO:0001030"
157157
} ],
158158
"http://sbols.org/v3#instanceOf" : [ {
159159
"@id" : "https://synbiohub.org/public/igem/BBa_B0012"
@@ -171,7 +171,7 @@
171171
"@value" : "81"
172172
} ],
173173
"http://sbols.org/v3#orientation" : [ {
174-
"@id" : "http://sbols.org/v3#inline"
174+
"@id" : "https://identifiers.org/SO:0001030"
175175
} ],
176176
"http://sbols.org/v3#hasSequence" : [ {
177177
"@id" : "https://synbiohub.org/public/igem/BBa_B0015_Sequence1"
@@ -520,7 +520,7 @@
520520
}, {
521521
"@id" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent3",
522522
"http://sbols.org/v3#orientation" : [ {
523-
"@id" : "http://sbols.org/v3#inline"
523+
"@id" : "https://identifiers.org/SO:0001030"
524524
} ],
525525
"http://sbols.org/v3#instanceOf" : [ {
526526
"@id" : "https://synbiohub.org/public/igem/BBa_R0040"
@@ -538,7 +538,7 @@
538538
"@value" : "1"
539539
} ],
540540
"http://sbols.org/v3#orientation" : [ {
541-
"@id" : "http://sbols.org/v3#inline"
541+
"@id" : "https://identifiers.org/SO:0001030"
542542
} ],
543543
"http://sbols.org/v3#hasSequence" : [ {
544544
"@id" : "https://synbiohub.org/public/igem/BBa_F2620_Sequence1"
@@ -553,7 +553,7 @@
553553
}, {
554554
"@id" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent4",
555555
"http://sbols.org/v3#orientation" : [ {
556-
"@id" : "http://sbols.org/v3#inline"
556+
"@id" : "https://identifiers.org/SO:0001030"
557557
} ],
558558
"http://sbols.org/v3#instanceOf" : [ {
559559
"@id" : "https://synbiohub.org/public/igem/BBa_B0034"
@@ -571,7 +571,7 @@
571571
"@value" : "55"
572572
} ],
573573
"http://sbols.org/v3#orientation" : [ {
574-
"@id" : "http://sbols.org/v3#inline"
574+
"@id" : "https://identifiers.org/SO:0001030"
575575
} ],
576576
"http://sbols.org/v3#hasSequence" : [ {
577577
"@id" : "https://synbiohub.org/public/igem/BBa_F2620_Sequence1"
@@ -586,7 +586,7 @@
586586
}, {
587587
"@id" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent5",
588588
"http://sbols.org/v3#orientation" : [ {
589-
"@id" : "http://sbols.org/v3#inline"
589+
"@id" : "https://identifiers.org/SO:0001030"
590590
} ],
591591
"http://sbols.org/v3#instanceOf" : [ {
592592
"@id" : "https://synbiohub.org/public/igem/BBa_C0062"
@@ -604,7 +604,7 @@
604604
"@value" : "67"
605605
} ],
606606
"http://sbols.org/v3#orientation" : [ {
607-
"@id" : "http://sbols.org/v3#inline"
607+
"@id" : "https://identifiers.org/SO:0001030"
608608
} ],
609609
"http://sbols.org/v3#hasSequence" : [ {
610610
"@id" : "https://synbiohub.org/public/igem/BBa_F2620_Sequence1"
@@ -619,7 +619,7 @@
619619
}, {
620620
"@id" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent6",
621621
"http://sbols.org/v3#orientation" : [ {
622-
"@id" : "http://sbols.org/v3#inline"
622+
"@id" : "https://identifiers.org/SO:0001030"
623623
} ],
624624
"http://sbols.org/v3#instanceOf" : [ {
625625
"@id" : "https://synbiohub.org/public/igem/BBa_B0015"
@@ -637,7 +637,7 @@
637637
"@value" : "848"
638638
} ],
639639
"http://sbols.org/v3#orientation" : [ {
640-
"@id" : "http://sbols.org/v3#inline"
640+
"@id" : "https://identifiers.org/SO:0001030"
641641
} ],
642642
"http://sbols.org/v3#hasSequence" : [ {
643643
"@id" : "https://synbiohub.org/public/igem/BBa_F2620_Sequence1"
@@ -652,7 +652,7 @@
652652
}, {
653653
"@id" : "https://synbiohub.org/public/igem/BBa_F2620/SubComponent7",
654654
"http://sbols.org/v3#orientation" : [ {
655-
"@id" : "http://sbols.org/v3#inline"
655+
"@id" : "https://identifiers.org/SO:0001030"
656656
} ],
657657
"http://sbols.org/v3#instanceOf" : [ {
658658
"@id" : "https://synbiohub.org/public/igem/BBa_R0062"
@@ -670,7 +670,7 @@
670670
"@value" : "969"
671671
} ],
672672
"http://sbols.org/v3#orientation" : [ {
673-
"@id" : "http://sbols.org/v3#inline"
673+
"@id" : "https://identifiers.org/SO:0001030"
674674
} ],
675675
"http://sbols.org/v3#hasSequence" : [ {
676676
"@id" : "https://synbiohub.org/public/igem/BBa_F2620_Sequence1"

0 commit comments

Comments
 (0)