chore: combined dependency update (#3451)

* build(deps): (deps): bump networkx from 2.6.3 to 3.1
* build(deps): (deps): bump rq-scheduler from 0.11.0 to 0.13.1
* build(deps): (deps-dev): bump pytest-flake8 from 1.1.0 to 1.1.1
* build(deps): (deps): bump deepdiff from 5.8.1 to 6.3.0
* update lock file
* bump poetry-dynamic-versioning

Author: github-actions[bot]