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ENH: Add PlusConfiguration_Sonix_Ascension_LegoPhantom.xml
Add config file referenced in Lego fCal phantom pdf.
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‎ConfigFiles/PlusConfiguration_Sonix_Ascension_LegoPhantom.xml‎

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<PlusConfiguration version="2.1">
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<DataCollection StartupDelaySec="1.0">
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<DeviceSet
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Name="SonixTouch and Ascension3DG with Lego Phantom"
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Description="Ascension3DG sensors should be plugged in to the Ascension3DG DriveBay mounted on SonixTouch in the following order from to leftmost slot (Transducer 1) to the right: 1 Probe, 2 Reference, 3 Stylus."
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/>
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<Device
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Id="TrackerDevice"
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Type="Ascension3DG"
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AcquisitionRate="50"
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LocalTimeOffsetSec="0.0"
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FilterAcWideNotch="1" >
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<DataSources>
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<DataSource Type="Tool" Id="Probe" BufferSize="500" PortName="0" AveragedItemsForFiltering="20" />
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<DataSource Type="Tool" Id="Reference" BufferSize="500" PortName="1" AveragedItemsForFiltering="20" />
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<DataSource Type="Tool" Id="Stylus" BufferSize="500" PortName="2" AveragedItemsForFiltering="20" />
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</DataSources>
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<OutputChannels>
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<OutputChannel Id="TrackerStream" >
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<DataSource Id="Probe"/>
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<DataSource Id="Reference"/>
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<DataSource Id="Stylus"/>
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</OutputChannel>
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</OutputChannels>
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</Device>
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<Device
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Id="VideoDevice"
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Type="SonixVideo"
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AcquisitionRate="30"
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LocalTimeOffsetSec="0"
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IP="127.0.0.1"
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Depth="-1"
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Sector="-1"
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Gain="-1"
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DynRange="-1"
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Zoom="-1"
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Frequency="-1"
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Timeout="-1"
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CompressionStatus="0" >
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<DataSources>
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<DataSource Type="Video" Id="Video" PortName="B" PortUsImageOrientation="UF" BufferSize="100" AveragedItemsForFiltering="20" />
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</DataSources>
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<OutputChannels>
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<OutputChannel Id="VideoStream" VideoDataSourceId="Video" />
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</OutputChannels>
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</Device>
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<Device
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Id="TrackedVideoDevice"
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Type="VirtualMixer" >
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<InputChannels>
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<InputChannel Id="TrackerStream" />
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<InputChannel Id="VideoStream" />
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</InputChannels>
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<OutputChannels>
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<OutputChannel Id="TrackedVideoStream"/>
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</OutputChannels>
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</Device>
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</DataCollection>
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<CoordinateDefinitions>
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<Transform From="Image" To="TransducerOriginPixel"
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Matrix="
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1 0 0 -410
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0 1 0 5
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0 0 1 0
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0 0 0 1"
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Date="2011.12.06 17:57:00"/>
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<Transform From="TransducerOriginPixel" To="TransducerOrigin"
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Matrix="
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0.0796446 0 0 0
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0 0.0744856 0 0
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0 0 0.0770651 0
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0 0 0 1"
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Date="091112_160011"/>
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</CoordinateDefinitions>
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<Rendering WorldCoordinateFrame="Reference" DisplayedImageOrientation="MF">
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<DisplayableObject Type="Model" ObjectCoordinateFrame="TransducerOrigin" Id="ProbeModel"
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File="L14-5_38_ProbeModel.stl"
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ModelToObjectTransform="
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-1 0 0 29.7
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0 -1 0 1.5
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0 0 1 -14
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0 0 0 1"
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/>
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<DisplayableObject Type="Model" ObjectCoordinateFrame="Reference" Id="Volume"/>
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<DisplayableObject Type="Model" ObjectCoordinateFrame="StylusTip" Id="StylusModel"
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File="Stylus_Example.stl"
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ModelToObjectTransform="
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1 0 0 -210.0
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0 1 0 0
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0 0 1 0
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0 0 0 1"
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/>
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<DisplayableObject Id="PhantomModel" Type="Model" ObjectCoordinateFrame="Phantom"
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Opacity="0.6"
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File="LegoPhantom.stl"
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ModelToObjectTransform="
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1 0 0 0
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0 1 0 0
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0 0 1 0
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0 0 0 1"
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/>
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<DisplayableObject Type="Image" ObjectCoordinateFrame="Image" Id="LiveImage"/>
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</Rendering>
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<Segmentation
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ApproximateSpacingMmPerPixel="0.078"
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MorphologicalOpeningCircleRadiusMm="0.27"
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MorphologicalOpeningBarSizeMm="1.0"
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ClipRectangleOrigin="27 27"
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ClipRectangleSize="766 562"
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MaxLinePairDistanceErrorPercent="10"
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AngleToleranceDegrees="10"
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MaxAngleDifferenceDegrees="10"
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MinThetaDegrees="-70"
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MaxThetaDegrees="70"
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MaxLineShiftMm="10.0"
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ThresholdImagePercent="10"
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CollinearPointsMaxDistanceFromLineMm="0.6"
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UseOriginalImageIntensityForDotIntensityScore="0"
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/>
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<PhantomDefinition>
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<!-- Supported types are: Double-N, U-Shaped-N -->
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<Description
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Name="Lego"
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Type="Triple-N"
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Version="1.4"
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WiringVersion="1.0"
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Institution="Queen's University PerkLab"
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/>
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<Geometry>
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<Pattern Type="NWire"> <!-- top row from left to right -->
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<Wire Name="7:E1_e1" EndPointFront="17.3 0 19.54" EndPointBack="17.30 40.10 19.54" />
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<Wire Name="8:K1_f1" EndPointFront="39.7 0 19.54" EndPointBack="24.8 40.10 19.54" />
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<Wire Name="9:L1_l1" EndPointFront="46.54 0 19.54" EndPointBack="46.54 40.10 19.54" />
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</Pattern>
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<Pattern Type="NWire"> <!-- middle row from left to right -->
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<Wire Name="4:E2_e2" EndPointFront="17.3 0 9.81" EndPointBack="17.3 40.10 9.81" />
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<Wire Name="5:F2_m2" EndPointFront="24.8 0 9.81" EndPointBack="39.9 40.10 9.81" />
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<Wire Name="6:L2_l2" EndPointFront="46.54 0 9.81" EndPointBack="46.54 40.10 9.81" />
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</Pattern>
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<Pattern Type="NWire"> <!-- bottom row from left to right -->
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<Wire Name="1:G3_g3" EndPointFront="26.0 0 0.08" EndPointBack="26.0 40.10 0.08" />
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<Wire Name="2:K3_h3" EndPointFront="40.6 0 0.08" EndPointBack="32.0 40.10 0.08" />
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<Wire Name="3:L3_l3" EndPointFront="46.54 0 0.08" EndPointBack="46.54 40.10 0.08" />
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</Pattern>
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<Landmarks>
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<Landmark Name="#1" Position="77.9 -6.0 23.2" />
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<Landmark Name="#2" Position="77.9 46.2 22.3" />
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<Landmark Name="#3" Position="78.3 53.6 2.9" />
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<Landmark Name="#4" Position="69.9 -13.8 3.9" />
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<Landmark Name="#5" Position="-14.0 45.3 20.6" />
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<Landmark Name="#6" Position="-13.6 -5.5 21.6" />
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<Landmark Name="#7" Position="-37.5 10.7 1.6" />
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<Landmark Name="#8" Position="-38.1 37.2 1.2" />
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</Landmarks>
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</Geometry>
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</PhantomDefinition>
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<VolumeReconstruction OutputSpacing="0.5 0.5 0.5"
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ClipRectangleOrigin="0 0" ClipRectangleSize="820 616"
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Interpolation="LINEAR" Optimization="FULL" Compounding="On" FillHoles="Off"
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/>
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<fCal
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PhantomModelId="PhantomModel"
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ReconstructedVolumeId="Volume"
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TransducerModelId="ProbeModel"
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StylusModelId="StylusModel"
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ImageDisplayableObjectId="LiveImage"
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NumberOfCalibrationImagesToAcquire="140"
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NumberOfValidationImagesToAcquire="70"
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NumberOfStylusCalibrationPointsToAcquire="200"
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RecordingIntervalMs="100"
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MaxTimeSpentWithProcessingMs="70"
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ImageCoordinateFrame="Image"
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ProbeCoordinateFrame="Probe"
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ReferenceCoordinateFrame="Reference"
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TransducerOriginCoordinateFrame="TransducerOrigin"
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TransducerOriginPixelCoordinateFrame="TransducerOriginPixel"
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TemporalCalibrationDurationSec="10"
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DefaultSelectedChannelId="TrackedVideoStream"
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/>
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<vtkPivotCalibrationAlgo
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ObjectMarkerCoordinateFrame="Stylus"
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ReferenceCoordinateFrame="Reference"
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ObjectPivotPointCoordinateFrame="StylusTip"
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/>
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<vtkPhantomRegistrationAlgo
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PhantomCoordinateFrame="Phantom"
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ReferenceCoordinateFrame="Reference"
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StylusTipCoordinateFrame="StylusTip"
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/>
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<vtkProbeCalibrationAlgo
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ImageCoordinateFrame="Image"
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ProbeCoordinateFrame="Probe"
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PhantomCoordinateFrame="Phantom"
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ReferenceCoordinateFrame="Reference"
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/>
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</PlusConfiguration>

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