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1 parent 0c99ced commit a7b99d2Copy full SHA for a7b99d2
2 files changed
build/docker/Dockerfile.upload
@@ -9,3 +9,4 @@ RUN apt-get update && apt-get install -y git
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RUN git clone https://github.com/PNNL-CompBio/coderdata.git
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WORKDIR /usr/src/app/coderdata
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+RUN git checkout panc_pdo
schema/expected_files.yaml
@@ -210,3 +210,15 @@ datasets:
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file: /tmp/prism_experiments.tsv
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- target_class: Drug
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file: /tmp/prism_drugs.tsv
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+
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+ pancpdo:
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+ - target_class: Sample
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+ file: /tmp/pancpdo_samples.csv
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+ - target_class: Transcriptomics
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+ file: /tmp/pancpdo_transcriptomics.csv
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+ - target_class: Experiments
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+ file: /tmp/pancpdo_experiments.tsv
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+ - target_class: Drug
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+ file: /tmp/pancpdo_drugs.tsv
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+ - target_class: Drug Descriptor
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+ file: /tmp/pancpdo_drug_descriptors.tsv
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