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Deployment: Update the upgrade script #3492

@ghost

Description

As a developer, I want the upgrade script to be up to date so that I can install the latest version of IBEX on instruments more easily.

Include:

  • Tell the user to copy the third part installs from the share before installing.
  • Run the java panel updater as admin to check that auto-update is off.
  • Python does not always install (does it maybe use something local and then can't delete the python dir)
  • Sometime python can't find ps utils after restart is it using the wrong python in the script (should be using the network python and libraries)
  • Error should be produced if upgrade script fails to run
  • Got `Checking that configurations are being pushed to the appropriate repository
    Current repository status is: On branch NDXEMMA-A
    Your branch is up to date with 'origin/NDXEMMA-A'.

nothing to commit, working tree clean
Unexpected git status. Please confirm that configurations are being pushed to the appropriate remote repository` eevben though this is fine.

This came about while upgrading instruments to IBEX version 5.0.1 (see #3414)

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