Skip to content

Commit 23aab23

Browse files
corilocorilo
committed
revert thermo file back to stable version
1 parent 551a4e5 commit 23aab23

53 files changed

Lines changed: 130479 additions & 267563 deletions

File tree

Some content is hidden

Large Commits have some content hidden by default. Use the searchbox below for content that may be hidden.

‎ext_lib/ChemstationMSFileReader.dll‎

100755100644
File mode changed.

‎ext_lib/ChemstationMSFileReader.xml‎

100755100644
Lines changed: 125 additions & 125 deletions
Original file line numberDiff line numberDiff line change
@@ -1,126 +1,126 @@
1-
<?xml version="1.0"?>
2-
<doc>
3-
<assembly>
4-
<name>
5-
ChemstationMSFileReader
6-
</name>
7-
</assembly>
8-
<members>
9-
<member name="M:ChemstationMSFileReader.clsChemstationDataMSFileReader.#ctor(System.String)">
10-
<summary>
11-
Open the specified data file and read the data headers
12-
</summary>
13-
<param name="sDatafilePath">Path to the file to read</param>
14-
<remarks></remarks>
15-
</member><member name="M:ChemstationMSFileReader.clsChemstationDataMSFileReader.GetSpectrum(System.Int32,ChemstationMSFileReader.clsSpectralRecord@,System.Int32@)">
16-
<summary>
17-
Returns the mass spectrum at the specified index
18-
</summary>
19-
<param name="intSpectrumIndex">0-based spectrum index</param>
20-
<param name="oSpectrum">Spectrum object (output)</param>
21-
<param name="intTotalSignalRawFromIndex">TIC value as reported by the Index; this value has been scaled down by some sort of polynomial transformation</param>
22-
<returns>True if success, false if an error</returns>
23-
</member><member name="M:ChemstationMSFileReader.clsChemstationDataMSFileReader.ReadHeaders(System.String)">
24-
<summary>
25-
Open the data file and read the header sections from the data file
26-
</summary>
27-
<param name="sDataFilePath">Path to the file to read</param>
28-
<returns>True if success, false if an error</returns>
29-
<remarks>The file handle will remain open until this class is disposed of</remarks>
30-
</member><member name="M:ChemstationMSFileReader.clsChemstationDataMSFileReader.ReadIndexRecords(System.IO.FileStream@)">
31-
<summary>
32-
Reads the index entries (aka directory records)
33-
</summary>
34-
<param name="fsDatafile"></param>
35-
<returns>True if success, false if an error</returns>
36-
</member><member name="M:ChemstationMSFileReader.clsChemstationDataMSFileReader.ReadNormalizationRecords(System.IO.FileStream@)">
37-
<summary>
38-
Reads the 10 normalization records from the data file
39-
</summary>
40-
<param name="fsDatafile"></param>
41-
<returns>True if success, false if an error</returns>
42-
</member><member name="M:ChemstationMSFileReader.clsSpectralRecord.#ctor">
43-
<summary>
44-
Instantiate a new spectrum object
45-
</summary>
46-
<remarks></remarks>
47-
</member><member name="M:ChemstationMSFileReader.clsSpectralRecord.#ctor(System.IO.FileStream@,System.Int32)">
48-
<summary>
49-
Populate a spectrum object with the data at the specified byte offset
50-
</summary>
51-
</member><member name="M:ChemstationMSFileReader.clsSpectralRecord.Clear">
52-
<summary>
53-
Initialize the variables and data structures
54-
</summary>
55-
<remarks></remarks>
56-
</member><member name="M:ChemstationMSFileReader.clsSpectralRecord.ReadFromFile(System.IO.FileStream@,System.Int32)">
57-
<summary>
58-
Read the spectrum at the specified byte offset
59-
</summary>
60-
<param name="fsDatafile"></param>
61-
<param name="intByteOffsetStart"></param>
62-
<remarks></remarks>
63-
</member><member name="M:ChemstationMSFileReader.clsSpectralRecord.ReadPackedAbundance(System.IO.FileStream@)">
64-
<summary>
65-
Read packed abundance stored as 2-bit scale with 14 bit mantissa
66-
</summary>
67-
<param name="fs">FileStream object</param>
68-
<returns>Unpacked abundance</returns>
69-
</member><member name="M:ChemstationMSFileReader.clsByteConverter.ReadInt16SwapBytes(System.IO.FileStream@)">
70-
<summary>
71-
Reads an Int16 from the filestream
72-
Swaps bytes prior to converting
73-
</summary>
74-
<param name="fs">FileStream object</param>
75-
<returns>The value, as an Int16 number</returns>
76-
</member><member name="M:ChemstationMSFileReader.clsByteConverter.ReadUInt16SwapBytes(System.IO.FileStream@)">
77-
<summary>
78-
Reads an UInt16 from the filestream
79-
Swaps bytes prior to converting
80-
</summary>
81-
<param name="fs">FileStream object</param>
82-
<returns>The value, as an Int32 number</returns>
83-
</member><member name="M:ChemstationMSFileReader.clsByteConverter.ReadInt32SwapBytes(System.IO.FileStream@)">
84-
<summary>
85-
Reads an Int32 from the filestream
86-
Swaps bytes prior to converting
87-
</summary>
88-
<param name="fs">FileStream object</param>
89-
<returns>The value, as an Int32 number</returns>
90-
</member><member name="M:ChemstationMSFileReader.clsByteConverter.ReadSingleSwapBytes(System.IO.FileStream@)">
91-
<summary>
92-
Reads a 4-byte single (real) from the filestream
93-
Swaps bytes prior to converting
94-
</summary>
95-
<param name="fs">FileStream object</param>
96-
<returns>The value, as a single-precision number</returns>
97-
</member><member name="M:ChemstationMSFileReader.clsByteConverter.ReadString(System.IO.FileStream@,System.Int32,System.Boolean)">
98-
<summary>
99-
Reads a fixed-length string from the filestream
100-
Optionally advances the reader one byte after reading the string
101-
</summary>
102-
<param name="fs">FileStream object</param>
103-
<param name="iStringLength">String length</param>
104-
<param name="bAdvanceExtraByte">If true, then advances the read an extra byte after reading the string</param>
105-
<returns>The string read</returns>
106-
</member><member name="M:ChemstationMSFileReader.clsByteConverter.WordOffsetToBytes(System.Int32)">
107-
<summary>
108-
Convert byte-offset stored in words into bytes
109-
</summary>
110-
<param name="iOffsetWords"></param>
111-
<returns>The byte offset, in bytes</returns>
112-
</member><member name="M:ChemstationMSFileReader.clsDataHeader.#ctor(System.IO.FileStream@)">
113-
<summary>
114-
Read header from the specified file
115-
</summary>
116-
<param name="fsDatafile"></param>
117-
<remarks></remarks>
118-
</member><member name="M:ChemstationMSFileReader.clsDataHeader.ReadFromFile(System.IO.FileStream@)">
119-
<summary>
120-
Read header from the specified file
121-
</summary>
122-
<param name="fs">Input file stream</param>
123-
<returns>True if success, false if an error</returns>
124-
</member>
125-
</members>
1+
<?xml version="1.0"?>
2+
<doc>
3+
<assembly>
4+
<name>
5+
ChemstationMSFileReader
6+
</name>
7+
</assembly>
8+
<members>
9+
<member name="M:ChemstationMSFileReader.clsChemstationDataMSFileReader.#ctor(System.String)">
10+
<summary>
11+
Open the specified data file and read the data headers
12+
</summary>
13+
<param name="sDatafilePath">Path to the file to read</param>
14+
<remarks></remarks>
15+
</member><member name="M:ChemstationMSFileReader.clsChemstationDataMSFileReader.GetSpectrum(System.Int32,ChemstationMSFileReader.clsSpectralRecord@,System.Int32@)">
16+
<summary>
17+
Returns the mass spectrum at the specified index
18+
</summary>
19+
<param name="intSpectrumIndex">0-based spectrum index</param>
20+
<param name="oSpectrum">Spectrum object (output)</param>
21+
<param name="intTotalSignalRawFromIndex">TIC value as reported by the Index; this value has been scaled down by some sort of polynomial transformation</param>
22+
<returns>True if success, false if an error</returns>
23+
</member><member name="M:ChemstationMSFileReader.clsChemstationDataMSFileReader.ReadHeaders(System.String)">
24+
<summary>
25+
Open the data file and read the header sections from the data file
26+
</summary>
27+
<param name="sDataFilePath">Path to the file to read</param>
28+
<returns>True if success, false if an error</returns>
29+
<remarks>The file handle will remain open until this class is disposed of</remarks>
30+
</member><member name="M:ChemstationMSFileReader.clsChemstationDataMSFileReader.ReadIndexRecords(System.IO.FileStream@)">
31+
<summary>
32+
Reads the index entries (aka directory records)
33+
</summary>
34+
<param name="fsDatafile"></param>
35+
<returns>True if success, false if an error</returns>
36+
</member><member name="M:ChemstationMSFileReader.clsChemstationDataMSFileReader.ReadNormalizationRecords(System.IO.FileStream@)">
37+
<summary>
38+
Reads the 10 normalization records from the data file
39+
</summary>
40+
<param name="fsDatafile"></param>
41+
<returns>True if success, false if an error</returns>
42+
</member><member name="M:ChemstationMSFileReader.clsSpectralRecord.#ctor">
43+
<summary>
44+
Instantiate a new spectrum object
45+
</summary>
46+
<remarks></remarks>
47+
</member><member name="M:ChemstationMSFileReader.clsSpectralRecord.#ctor(System.IO.FileStream@,System.Int32)">
48+
<summary>
49+
Populate a spectrum object with the data at the specified byte offset
50+
</summary>
51+
</member><member name="M:ChemstationMSFileReader.clsSpectralRecord.Clear">
52+
<summary>
53+
Initialize the variables and data structures
54+
</summary>
55+
<remarks></remarks>
56+
</member><member name="M:ChemstationMSFileReader.clsSpectralRecord.ReadFromFile(System.IO.FileStream@,System.Int32)">
57+
<summary>
58+
Read the spectrum at the specified byte offset
59+
</summary>
60+
<param name="fsDatafile"></param>
61+
<param name="intByteOffsetStart"></param>
62+
<remarks></remarks>
63+
</member><member name="M:ChemstationMSFileReader.clsSpectralRecord.ReadPackedAbundance(System.IO.FileStream@)">
64+
<summary>
65+
Read packed abundance stored as 2-bit scale with 14 bit mantissa
66+
</summary>
67+
<param name="fs">FileStream object</param>
68+
<returns>Unpacked abundance</returns>
69+
</member><member name="M:ChemstationMSFileReader.clsByteConverter.ReadInt16SwapBytes(System.IO.FileStream@)">
70+
<summary>
71+
Reads an Int16 from the filestream
72+
Swaps bytes prior to converting
73+
</summary>
74+
<param name="fs">FileStream object</param>
75+
<returns>The value, as an Int16 number</returns>
76+
</member><member name="M:ChemstationMSFileReader.clsByteConverter.ReadUInt16SwapBytes(System.IO.FileStream@)">
77+
<summary>
78+
Reads an UInt16 from the filestream
79+
Swaps bytes prior to converting
80+
</summary>
81+
<param name="fs">FileStream object</param>
82+
<returns>The value, as an Int32 number</returns>
83+
</member><member name="M:ChemstationMSFileReader.clsByteConverter.ReadInt32SwapBytes(System.IO.FileStream@)">
84+
<summary>
85+
Reads an Int32 from the filestream
86+
Swaps bytes prior to converting
87+
</summary>
88+
<param name="fs">FileStream object</param>
89+
<returns>The value, as an Int32 number</returns>
90+
</member><member name="M:ChemstationMSFileReader.clsByteConverter.ReadSingleSwapBytes(System.IO.FileStream@)">
91+
<summary>
92+
Reads a 4-byte single (real) from the filestream
93+
Swaps bytes prior to converting
94+
</summary>
95+
<param name="fs">FileStream object</param>
96+
<returns>The value, as a single-precision number</returns>
97+
</member><member name="M:ChemstationMSFileReader.clsByteConverter.ReadString(System.IO.FileStream@,System.Int32,System.Boolean)">
98+
<summary>
99+
Reads a fixed-length string from the filestream
100+
Optionally advances the reader one byte after reading the string
101+
</summary>
102+
<param name="fs">FileStream object</param>
103+
<param name="iStringLength">String length</param>
104+
<param name="bAdvanceExtraByte">If true, then advances the read an extra byte after reading the string</param>
105+
<returns>The string read</returns>
106+
</member><member name="M:ChemstationMSFileReader.clsByteConverter.WordOffsetToBytes(System.Int32)">
107+
<summary>
108+
Convert byte-offset stored in words into bytes
109+
</summary>
110+
<param name="iOffsetWords"></param>
111+
<returns>The byte offset, in bytes</returns>
112+
</member><member name="M:ChemstationMSFileReader.clsDataHeader.#ctor(System.IO.FileStream@)">
113+
<summary>
114+
Read header from the specified file
115+
</summary>
116+
<param name="fsDatafile"></param>
117+
<remarks></remarks>
118+
</member><member name="M:ChemstationMSFileReader.clsDataHeader.ReadFromFile(System.IO.FileStream@)">
119+
<summary>
120+
Read header from the specified file
121+
</summary>
122+
<param name="fs">Input file stream</param>
123+
<returns>True if success, false if an error</returns>
124+
</member>
125+
</members>
126126
</doc>

‎ext_lib/ThermoFisher.CommonCore.BackgroundSubtraction.dll‎

-1 KB
Binary file not shown.

0 commit comments

Comments
 (0)